RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 OR2T34Q8NGX1 318 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 OR2T3Q8NH03 318 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 SNRNP27Q8WVK2 155 aaKnown RBP18.5■□□□□ 0.55
USP48-204ENST00000400301 PNPLA3Q9NST1 481 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 SPASTQ9UBP0 616 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 GM2AP17900 193 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 HDCP19113 662 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 CCT8P50990 548 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 NUP107P57740 925 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 FAM151BQ6UXP7 276 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 TAGAPQ8N103 731 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 UGT2B28Q9BY64 529 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 DYRK4Q9NR20 520 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 CITO14578 2027 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 HSPA14Q0VDF9 509 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 P3H2Q8IVL5 708 aa18.5■□□□□ 0.55
USP48-204ENST00000400301 CPSF7Q8N684 471 aaKnown RBP18.5■□□□□ 0.55
USP48-204ENST00000400301 WDR83Q9BRX9 315 aaKnown RBP18.5■□□□□ 0.55
USP48-204ENST00000400301 GABRDO14764 452 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 C1RP00736 705 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 PRKCGP05129 697 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 PCNAP12004 261 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 MAPKAPK2P49137 400 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 DLG1Q12959 904 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 HERC3Q15034 1050 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 EP400NLQ6ZTU2 488 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 HBEGFQ99075 208 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 TLE6Q9H808 572 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 ZNHIT2Q9UHR6 403 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 INVSQ9Y283 1065 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 FAM32AQ9Y421 112 aaKnown RBP18.49■□□□□ 0.55
USP48-204ENST00000400301 FAM149AA5PLN7 773 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 PRMT5O14744 637 aaPredicted RBP18.49■□□□□ 0.55
USP48-204ENST00000400301 ULK1O75385 1050 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 CORO1AP31146 461 aaKnown RBP18.49■□□□□ 0.55
USP48-204ENST00000400301 GPR15P49685 360 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 SP3Q02447 781 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 LRRC74AQ0VAA2 488 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 MAPKAPK3Q16644 382 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 ITIH5Q86UX2 942 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 PIM3Q86V86 326 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 TSGA13Q96PP4 275 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 EMILIN2Q9BXX0 1053 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 SLC25A13Q9UJS0 675 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 SLC13A4Q9UKG4 626 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 KCTD3Q9Y597 815 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 THSD7AQ9UPZ6 1657 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 RBM47A0AV96 593 aaKnown RBP18.49■□□□□ 0.55
USP48-204ENST00000400301 SYN3O14994 580 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 CNTN5O94779 1100 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 IMPDH1P20839 514 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 SERPINA4P29622 427 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 S100A3P33764 101 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 MAPK10P53779 464 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 CCL23P55773 120 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 NAA20P61599 178 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 USP41Q3LFD5 358 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 SIRPB2Q5JXA9 342 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 UBXN11Q5T124 520 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 TXNDC5Q8NBS9 432 aaKnown RBP18.49■□□□□ 0.55
USP48-204ENST00000400301 MAGEH1Q9H213 219 aa18.49■□□□□ 0.55
USP48-204ENST00000400301 ZFP37Q9Y6Q3 630 aaPredicted RBP18.49■□□□□ 0.55
USP48-204ENST00000400301 ZCWPW2A0A1B0GU75 182 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 MSH3P20585 1137 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 UPP1Q16831 310 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 SFT2D3Q587I9 215 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 MSANTD2Q6P1R3 559 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 GOLGA4Q13439 2230 aaKnown RBP18.48■□□□□ 0.55
USP48-204ENST00000400301 WEE1P30291 646 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 FUT10Q6P4F1 479 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 SELENOMQ8WWX9 145 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 KCNN1Q92952 543 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 PPM1MQ96MI6 270 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 MFSD1Q9H3U5 465 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 ZBTB26Q9HCK0 441 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 H3BMM5 538 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 KCNH1O95259 989 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 OTCP00480 354 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 SLC35E2BP0CK96 405 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 ACVRL1P37023 503 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 TLDC1Q6P9B6 456 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 ADCK1Q86TW2 530 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 MZB1Q8WU39 189 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 PPP3R2Q96LZ3 170 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 GNPTGQ9UJJ9 305 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 UNCXA6NJT0 531 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 MGEA5O60502 916 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 EPB42P16452 691 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 CES1P23141 567 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 SERPINB10P48595 397 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 MTTPP55157 894 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 TNK2Q07912 1038 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 BTG3Q14201 252 aaPredicted RBP18.48■□□□□ 0.55
USP48-204ENST00000400301 NAPRTQ6XQN6 538 aa18.48■□□□□ 0.55
USP48-204ENST00000400301 MBLAC1A4D2B0 266 aaPredicted RBP18.47■□□□□ 0.55
USP48-204ENST00000400301 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.47■□□□□ 0.55
USP48-204ENST00000400301 HS6ST1O60243 411 aa18.47■□□□□ 0.55
USP48-204ENST00000400301 ANXA5P08758 320 aa18.47■□□□□ 0.55
USP48-204ENST00000400301 CD68P34810 354 aaPredicted RBP18.47■□□□□ 0.55
USP48-204ENST00000400301 RPS24P62847 133 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms