RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SEC31AO94979 1220 aaKnown RBP7.5□□□□□ -1.21
USP16-204ENST00000399976 PCDH8O95206 1070 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 CSF2P04141 144 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 TUBBP07437 444 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 OGNP20774 298 aaKnown RBP7.5□□□□□ -1.21
USP16-204ENST00000399976 CSRP1P21291 193 aaKnown RBP7.5□□□□□ -1.21
USP16-204ENST00000399976 HTR1BP28222 390 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 GKP32189 559 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 PPARGP37231 505 aaPredicted RBP7.5□□□□□ -1.21
USP16-204ENST00000399976 NAB1Q13506 487 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 SKIDA1Q1XH10 827 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 WASH2PQ6VEQ5 465 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 PRR23CQ6ZRP0 262 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 GLT6D1Q7Z4J2 308 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 HSD11B1LQ7Z5J1 315 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 TMEM135Q86UB9 458 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 PARGQ86W56 976 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 PPHLN1Q8NEY8 458 aaKnown RBP7.5□□□□□ -1.21
USP16-204ENST00000399976 IPMKQ8NFU5 416 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 OR6C4Q8NGE1 309 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 OR6K2Q8NGY2 324 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 RMDN1Q96DB5 314 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 HIC2Q96JB3 615 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 SERAC1Q96JX3 654 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 WDR92Q96MX6 357 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 FAM83DQ9H4H8 585 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 EBF2Q9HAK2 575 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 WASH6PQ9NQA3 447 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 GDF3Q9NR23 364 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 FAM114A2Q9NRY5 505 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 POLR3BQ9NW08 1133 aaPredicted RBP7.5□□□□□ -1.21
USP16-204ENST00000399976 R4GN57 208 aa7.5□□□□□ -1.21
USP16-204ENST00000399976 CACNB4O00305 520 aaPredicted RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 NEMP1O14524 444 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 FSBPO95073 299 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 MAP3K6O95382 1288 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 RPS3P23396 243 aaKnown RBP eCLIP7.49□□□□□ -1.21
USP16-204ENST00000399976 DHPSP49366 369 aaPredicted RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 CCT8P50990 548 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 XIAPP98170 497 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 ILKQ13418 452 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 TSTD2Q5T7W7 516 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 RNF187Q5TA31 235 aaPredicted RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 AGAP9Q5VTM2 703 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 SEL1L3Q68CR1 1132 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 AFTPHQ6ULP2 937 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 SNX20Q7Z614 316 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 CNTN4Q8IWV2 1026 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 ZCCHC9Q8N567 271 aaKnown RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 C16orf45Q96MC5 204 aaPredicted RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 TIMM29Q9BSF4 260 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 UCK1Q9HA47 277 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 CD93Q9NPY3 652 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 SEMA4GQ9NTN9 838 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 NCDNQ9UBB6 729 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 PCOLCE2Q9UKZ9 415 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 ADAMTS9Q9P2N4 1935 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 CACNA1EQ15878 2313 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 E7EVH7 732 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 GAPDHSO14556 408 aaPredicted RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 FLRT2O43155 660 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 PMPCBO75439 489 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 DKK1O94907 266 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 ALPIP09923 528 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 PNLIPP16233 465 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 PAMP19021 973 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 PTGER3P43115 390 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 C21orf59P57076 290 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 FAM193AP78312 1265 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 CDK3Q00526 305 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 CACNG1Q06432 222 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 GPS1Q13098 491 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 CUL1Q13616 776 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 SUZ12Q15022 739 aaKnown RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 PPP1R7Q15435 360 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 LYSMD3Q7Z3D4 306 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 PHYKPLQ8IUZ5 450 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 TMEFF1Q8IYR6 380 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 PDCD7Q8N8D1 485 aaKnown RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 NETO2Q8NC67 525 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 ART4Q93070 314 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 RTKNQ9BST9 563 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 DUSP23Q9BVJ7 150 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 AP1M1Q9BXS5 423 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 GPR63Q9BZJ6 419 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 WDR26Q9H7D7 661 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 LATS2Q9NRM7 1088 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 NSMCE4AQ9NXX6 385 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 ANKRD6Q9Y2G4 727 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 UTP11Q9Y3A2 253 aaKnown RBP7.49□□□□□ -1.21
USP16-204ENST00000399976 SPO11Q9Y5K1 396 aa7.49□□□□□ -1.21
USP16-204ENST00000399976 C17orf113A0A1B0GUU1 675 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 CCDC189A1A4V9 331 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 CTAGE15A4D2H0 777 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 SDR42E2A6NKP2 422 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 EIF3FO00303 357 aaPredicted RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 DYNC1I1O14576 645 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 MMP20O60882 483 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 RASGRP1O95267 797 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms