RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CSF3RQ99062 836 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 MAF1Q9H063 256 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SIAEQ9HAT2 523 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CASS4Q9NQ75 786 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 DDIT4Q9NX09 232 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CMTM6Q9NX76 183 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 AASSQ9UDR5 926 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 NDUFAF1Q9Y375 327 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 LZTS3O60299 673 aaPredicted RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 NOBOXO60393 691 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 IPO13O94829 963 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CAPNS1P04632 268 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 HSPA1AP0DMV8 641 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 HSPA1BP0DMV9 641 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CYP2B6P20813 491 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 DCKP27707 260 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 KCNC1P48547 511 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 FOXA1P55317 472 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 TPTEP56180 551 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 SNX16P57768 344 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 TSPY1Q01534 308 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 INCA1Q0VD86 236 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 BST2Q10589 180 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 NFYCQ13952 458 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 DGCR6Q14129 220 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 FRG1Q14331 258 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CYBRD1Q53TN4 286 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 BTBD8Q5XKL5 378 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CRTC3Q6UUV7 619 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 ITIH5Q86UX2 942 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 PIM3Q86V86 326 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 HS3ST5Q8IZT8 346 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 PELI3Q8N2H9 469 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CHPT1Q8WUD6 406 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 GPR78Q96P69 363 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 GMLQ99445 158 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 FAM49AQ9H0Q0 323 aaPredicted RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 KIAA1257Q9ULG3 409 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 FAM32AQ9Y421 112 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 TCAF1Q9Y4C2 921 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 TIMM22Q9Y584 194 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CSADQ9Y600 493 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 H0YJX3 145 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 NDUFB5O43674 189 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CRCPO75575 148 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CLPXO76031 633 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 LDLRP01130 860 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 INSRRP14616 1297 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CPB1P15086 417 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 TKTP29401 623 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 SHMT2P34897 504 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 DIO3P55073 304 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 MAP3K7CLP57077 242 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 ITKQ08881 620 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 LAPTM5Q13571 262 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC25A52Q3SY17 297 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 PYCR3Q53H96 274 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 GPR158Q5T848 1215 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 FAM117BQ6P1L5 589 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 METTL7BQ6UX53 244 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 CADM3Q8N126 398 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 REPS2Q8NFH8 660 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 ABHD11Q8NFV4 315 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 RDH11Q8TC12 318 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 ANKRD49Q8WVL7 239 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 HTRA1Q92743 480 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 HBEGFQ99075 208 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 OLFM1Q99784 485 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 MRPL57Q9BQC6 102 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 C1orf50Q9BV19 199 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 NDEL1Q9GZM8 345 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 MARCH7Q9H992 704 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 MID1IP1Q9NPA3 183 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 ATAD3AQ9NVI7 634 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 FBXO5Q9UKT4 447 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 ANKRD6Q9Y2G4 727 aa9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 TMA7Q9Y2S6 64 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-202ENST00000398738 TTC24A2A3L6 582 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 OR51F1A6NGY5 319 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NCF1BA6NI72 391 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NCF1CA8MVU1 366 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 TARM1B6A8C7 271 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC22A2O15244 555 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 HGFP14210 728 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NCF1P14598 390 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 YBX3P16989 372 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 IRS1P35568 1242 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CD151P48509 253 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 MEP1AQ16819 746 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PKDCCQ504Y2 493 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 DCLRE1AQ6PJP8 1040 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CCDC81Q6ZN84 652 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 R3HCC1LQ7Z5L2 792 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 SH3RF2Q8TEC5 729 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ISL2Q96A47 359 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 C19orf60Q96EN9 201 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ITCHQ96J02 903 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NSUN5Q96P11 429 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms