RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ACSS2Q9NR19 701 aa14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 DDX18Q9NVP1 670 aaKnown RBP14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 COL2A1P02458 1487 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 GDI1P31150 447 aa14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 UBAP2LQ14157 1087 aaKnown RBP14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 GRM3Q14832 879 aa14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 ARL14EPQ8N8R7 260 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 RELTQ969Z4 430 aa14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 RAD51AP1Q96B01 352 aa14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 C9orf16Q9BUW7 83 aa14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 TRMT61BQ9BVS5 477 aaKnown RBP14.23□□□□□ -0.13
PCDHA11-201ENST00000398640 ALADP13716 330 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 RPL22P35268 128 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 BUD31P41223 144 aaPredicted RBP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 MTHFRP42898 656 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 IRGCQ6NXR0 463 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 MAMDC4Q6UXC1 1216 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 ARMCX6Q7L4S7 300 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 PRSS58Q8IYP2 241 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 HDDC3Q8N4P3 179 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 ENKURQ8TC29 256 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 TIMP1P01033 207 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 LPOP22079 712 aaPredicted RBP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 GRIA3P42263 894 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 MASP1P48740 699 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 MARCKSL1P49006 195 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 SLC34A1Q06495 639 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 LRRC32Q14392 662 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 AMZ1Q400G9 498 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 TTMPQ5BVD1 217 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 MORN1Q5T089 497 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 OFCC1Q8IZS5 231 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 TNFRSF25Q93038 417 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 ZNF354BQ96LW1 612 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 VPS35Q96QK1 796 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 IL12RB2Q99665 862 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 INTS7Q9NVH2 962 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 CYP1A2P05177 515 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 DDX6P26196 483 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 SRP54P61011 504 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 CST9Q5W186 159 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 PROSER1Q86XN7 944 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 NELL1Q92832 810 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 PMEPA1Q969W9 287 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 VPS4AQ9UN37 437 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 EPHB6O15197 1021 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 WARSP23381 471 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 CLCN5P51795 746 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 ACAP2Q15057 778 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 MAPKAPK3Q16644 382 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 GALNT13Q8IUC8 556 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 OR4A15Q8NGL6 344 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 HDAC10Q969S8 669 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 MBOAT7Q96N66 472 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 EQTNQ9NQ60 294 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 STON1Q9Y6Q2 735 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 IQCF3P0C7M6 154 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 CCNYL3P0C7X3 344 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 CDH3P22223 829 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 RAB10P61026 200 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 RPL7AP62424 266 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 CAP1Q01518 475 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 EPS8Q12929 822 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 NDUFAF6Q330K2 333 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 MINDY4Q4G0A6 757 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 INTS11Q5TA45 600 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 VITQ6UXI7 678 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 ADHFE1Q8IWW8 467 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 BPIFB6Q8NFQ5 453 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 TSTD1Q8NFU3 115 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 ANGPT4Q9Y264 503 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 CPQQ9Y646 472 aa14.22□□□□□ -0.13
PCDHA11-201ENST00000398640 CCNDBP1O95273 360 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 RABGGTBP53611 331 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 SEMA5AQ13591 1074 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 INO80DQ53TQ3 878 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 RPTNQ6XPR3 784 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 DEF8Q6ZN54 512 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 HMGB4Q8WW32 186 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 ATXN2LQ8WWM7 1075 aaKnown RBP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 BTN2A3PQ96KV6 586 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 BRINP2Q9C0B6 783 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 SLC39A8Q9C0K1 460 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 QSOX1O00391 747 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 MLYCDO95822 493 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 ALPPL2P10696 532 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 HNRNPLP14866 589 aaKnown RBP eCLIP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 GNSP15586 552 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 IGFALSP35858 605 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 GJA5P36382 358 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 LILRA4P59901 499 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 USP4Q13107 963 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 KIAA0408Q6ZU52 694 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 TMEM192Q8IY95 271 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 ZCCHC7Q8N3Z6 543 aaKnown RBP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 OR4L1Q8NH43 312 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 MCCC1Q96RQ3 725 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 COPG2Q9UBF2 871 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 MYRFQ9Y2G1 1151 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms