RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 HLA-DPA1P20036 260 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 BASP1P80723 227 aaKnown RBP25.42■■□□□ 1.66
U2AF1-203ENST00000398137 GPS1Q13098 491 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 SEMA5AQ13591 1074 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 STAT4Q14765 748 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 PPP1R7Q15435 360 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 WHAMMP3Q1A5X7 153 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 C4orf22Q6V702 233 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 KRT12Q99456 494 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 FEZ2Q9UHY8 353 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-203ENST00000398137 MRFAP1Q9Y605 127 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 FGF1P05230 155 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 PTGIRP43119 386 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 LMAN1P49257 510 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 TERF1P54274 439 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 OVGP1Q12889 678 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 ARHGEF7Q14155 803 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 DENND2CQ68D51 928 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 CRTC1Q6UUV9 634 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 LIPIQ6XZB0 460 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 GCNT7Q6ZNI0 430 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 LRRC45Q96CN5 670 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 RUNDC3BQ96NL0 473 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 FTSJ1Q9UET6 329 aa25.41■■□□□ 1.66
U2AF1-203ENST00000398137 SRRM3A6NNA2 597 aaPredicted RBP25.4■■□□□ 1.66
U2AF1-203ENST00000398137 ESPNB1AK53 854 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 PSMD3O43242 534 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 SLC4A1P02730 911 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 APRTP07741 180 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 CLDN2P57739 230 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 DR1Q01658 176 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 SGCGQ13326 291 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 LRRC66Q68CR7 880 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 RANBP10Q6VN20 620 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 ZNF572Q7Z3I7 529 aaPredicted RBP25.4■■□□□ 1.66
U2AF1-203ENST00000398137 EID2Q8N6I1 236 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 SLCO2A1Q92959 643 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 LYSMD1Q96S90 227 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 C1QTNF2Q9BXJ5 285 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 SLC17A9Q9BYT1 436 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 SPO11Q9Y5K1 396 aa25.4■■□□□ 1.66
U2AF1-203ENST00000398137 CELSR3Q9NYQ7 3312 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 C1orf232A0A0U1RR37 186 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 RAD51BO15315 384 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 YKT6O15498 198 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 LZTS3O60299 673 aaPredicted RBP25.39■■□□□ 1.66
U2AF1-203ENST00000398137 TM7SF2O76062 418 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 ARRB1P49407 418 aaPredicted RBP25.39■■□□□ 1.66
U2AF1-203ENST00000398137 DNAJC3Q13217 504 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 PTK6Q13882 451 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 ACOX1Q15067 660 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 LYSMD3Q7Z3D4 306 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 SLC22A18ASQ8N1D0 253 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 OR13H1Q8NG92 308 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 KLHDC7BQ96G42 594 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 BMFQ96LC9 184 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 SHOC2Q9UQ13 582 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 ZNF711Q9Y462 761 aa25.39■■□□□ 1.66
U2AF1-203ENST00000398137 TDRD6O60522 2096 aaKnown RBP25.39■■□□□ 1.65
U2AF1-203ENST00000398137 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-203ENST00000398137 ERI2A8K979 691 aaKnown RBP25.38■■□□□ 1.65
U2AF1-203ENST00000398137 SDC3O75056 442 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 PAK4O96013 591 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-203ENST00000398137 THEGLP0DJG4 465 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 HNRNPA2B1P22626 353 aaKnown RBP25.38■■□□□ 1.65
U2AF1-203ENST00000398137 TUBB2AQ13885 445 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 SMAD1Q15797 465 aaKnown RBP25.38■■□□□ 1.65
U2AF1-203ENST00000398137 INAVAQ3KP66 663 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 DENND5AQ6IQ26 1287 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 DHRS13Q6UX07 377 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 HSD11B1LQ7Z5J1 315 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 ABI3BPQ7Z7G0 1075 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 JAMLQ86YT9 394 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 OXR1Q8N573 874 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 CNDP2Q96KP4 475 aaKnown RBP25.38■■□□□ 1.65
U2AF1-203ENST00000398137 TRIM51Q9BSJ1 452 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 TUBB2BQ9BVA1 445 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 MAGEE1Q9HCI5 957 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 GPR27Q9NS67 375 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 PIH1D1Q9NWS0 290 aaKnown RBP25.38■■□□□ 1.65
U2AF1-203ENST00000398137 ASIC3Q9UHC3 531 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 LAMA5O15230 3695 aa25.38■■□□□ 1.65
U2AF1-203ENST00000398137 LRRK1Q38SD2 2015 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 TTI1O43156 1089 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 ZNF500O60304 480 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-203ENST00000398137 RECQL5O94762 991 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-203ENST00000398137 CLDN7O95471 211 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 C1SP09871 688 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 ZNF30P17039 623 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 GM2AP17900 193 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 MRPS25P82663 173 aaKnown RBP25.37■■□□□ 1.65
U2AF1-203ENST00000398137 CAMK2BQ13554 666 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 CDKN3Q16667 212 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 PPP1R21Q6ZMI0 780 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 SLC25A45Q8N413 288 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 BLOC1S5Q8TDH9 187 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 COQ10AQ96MF6 247 aa25.37■■□□□ 1.65
U2AF1-203ENST00000398137 KLF6Q99612 283 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-203ENST00000398137 EIF2B3Q9NR50 452 aaKnown RBP25.37■■□□□ 1.65
U2AF1-203ENST00000398137 GOLGA4Q13439 2230 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms