RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PID1Q7Z2X4 250 aa16.65■□□□□ 0.26
APTR-201ENST00000398043 KDELC2Q7Z4H8 507 aa16.65■□□□□ 0.26
APTR-201ENST00000398043 TMC3Q7Z5M5 1100 aa16.65■□□□□ 0.26
APTR-201ENST00000398043 SDR16C5Q8N3Y7 309 aa16.65■□□□□ 0.26
APTR-201ENST00000398043 FSTL5Q8N475 847 aaPredicted RBP16.65■□□□□ 0.26
APTR-201ENST00000398043 PTCD2Q8WV60 388 aaKnown RBP16.65■□□□□ 0.26
APTR-201ENST00000398043 AP2M1Q96CW1 435 aa16.65■□□□□ 0.26
APTR-201ENST00000398043 UBP1Q9NZI7 540 aa16.65■□□□□ 0.26
APTR-201ENST00000398043 FAM153AQ9UHL3 310 aa16.65■□□□□ 0.26
APTR-201ENST00000398043 TRHDEQ9UKU6 1024 aa16.65■□□□□ 0.26
APTR-201ENST00000398043 KMT2BQ9UMN6 2715 aaPredicted RBP16.65■□□□□ 0.26
APTR-201ENST00000398043 PRSS38A1L453 326 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 H7C0C1 242 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 KRT86O43790 486 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 PMPCBO75439 489 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 EPOP01588 193 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 RBP3P10745 1247 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 KELP23276 732 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 ATP5OP48047 213 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 WNT3AP56704 352 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 EIF3EP60228 445 aaKnown RBP16.64■□□□□ 0.25
APTR-201ENST00000398043 CAMK2BQ13554 666 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 HENMT1Q5T8I9 393 aaKnown RBP16.64■□□□□ 0.25
APTR-201ENST00000398043 LVRNQ6Q4G3 990 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 LYSMD3Q7Z3D4 306 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 MARCH9Q86YJ5 346 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 GALNT15Q8N3T1 639 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 UBL4BQ8N7F7 174 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 SCARF2Q96GP6 870 aaPredicted RBP16.64■□□□□ 0.25
APTR-201ENST00000398043 COX14Q96I36 57 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 MRGPRX2Q96LB1 330 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 FAM118BQ9BPY3 351 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 RIOK2Q9BVS4 552 aaKnown RBP16.64■□□□□ 0.25
APTR-201ENST00000398043 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 PHPT1Q9NRX4 125 aaPredicted RBP16.64■□□□□ 0.25
APTR-201ENST00000398043 KLHL8Q9P2G9 620 aaPredicted RBP16.64■□□□□ 0.25
APTR-201ENST00000398043 CNOT6Q9ULM6 557 aaKnown RBP16.64■□□□□ 0.25
APTR-201ENST00000398043 GUCA1BQ9UMX6 200 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 SLC17A4Q9Y2C5 497 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 APC2O95996 2303 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 CACNA1BQ00975 2339 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.25
APTR-201ENST00000398043 TCRBV7S2A1N4TA0A589 114 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 PDE2AO00408 941 aaPredicted RBP16.63■□□□□ 0.25
APTR-201ENST00000398043 TNFP01375 233 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 GP1BAP07359 652 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 ANXA6P08133 673 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 PIRTP0C851 137 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 CETN2P41208 172 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 CLDN6P56747 220 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 ELOCQ15369 112 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 CCDC157Q569K6 752 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 RAET1GQ6H3X3 334 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 UNQ6494/PRO21346Q6UXR6 183 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 RD3Q7Z3Z2 195 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 TMPRSS12Q86WS5 348 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 KLHDC8BQ8IXV7 354 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 SLC35F3Q8IY50 421 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 CACTIN-AS1Q8N1I8 211 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 GBA3Q9H227 469 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 NFKBIL1Q9UBC1 381 aaPredicted RBP16.63■□□□□ 0.25
APTR-201ENST00000398043 R3HDM2Q9Y2K5 976 aaKnown RBP16.63■□□□□ 0.25
APTR-201ENST00000398043 ZNF711Q9Y462 761 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 SPO11Q9Y5K1 396 aa16.63■□□□□ 0.25
APTR-201ENST00000398043 FREM2Q5SZK8 3169 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 PIKFYVEQ9Y2I7 2098 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 EME2A4GXA9 379 aaPredicted RBP16.62■□□□□ 0.25
APTR-201ENST00000398043 RGSL1A5PLK6 1076 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 FADS2P1A8MWK0 482 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 AURKAO14965 403 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 CCDC175P0C221 793 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 GPR1P46091 355 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 DAB2P98082 770 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 INSM1Q01101 510 aaPredicted RBP16.62■□□□□ 0.25
APTR-201ENST00000398043 MPP3Q13368 585 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 HS1BP3Q53T59 392 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 ANKRD20A2Q5SQ80 823 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 MEI1Q5TIA1 1274 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 CCDC181Q5TID7 509 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 ANKRD20A1Q5TYW2 823 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 ANKRD20A3Q5VUR7 823 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 GUSBP11Q6P575 273 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 NRROSQ86YC3 692 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 CDKL3Q8IVW4 592 aaPredicted RBP16.62■□□□□ 0.25
APTR-201ENST00000398043 CCL4L1Q8NHW4 92 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 SLC35B2Q8TB61 432 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 GPBAR1Q8TDU6 330 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 TMEM168Q9H0V1 697 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 ZFYVE1Q9HBF4 777 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 CYP4F12Q9HCS2 524 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 NCKIPSDQ9NZQ3 722 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 ST14Q9Y5Y6 855 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 ASPMQ8IZT6 3477 aa16.62■□□□□ 0.25
APTR-201ENST00000398043 WDFY3Q8IZQ1 3526 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 FAM149AA5PLN7 773 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 F5H423 210 aaPredicted RBP16.61■□□□□ 0.25
APTR-201ENST00000398043 PYGLP06737 847 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 PROS1P07225 676 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 IVLP07476 585 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms