RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FAM35AQ86V20 835 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 ZMIZ2Q8NF64 920 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 CALML6Q8TD86 181 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 PBXIP1Q96AQ6 731 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 TCF12Q99081 682 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 ADI1Q9BV57 179 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 MOV10Q9HCE1 1003 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 FBXO5Q9UKT4 447 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 TCAF1Q9Y4C2 921 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 A0A087X1B8 175 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 TCRBV3S1A0A5B6 114 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 NOTOA8MTQ0 251 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 SRP72O76094 671 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 SEC24DO94855 1032 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 KCNE1P15382 129 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 IDUAP35475 653 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 DNAJB13P59910 316 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 E2F2Q14209 437 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 IL31Q6EBC2 164 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 ATPAF2Q8N5M1 289 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 OR13F1Q8NGS4 319 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 LILRB4Q8NHJ6 448 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 ZFP42Q96MM3 310 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 GPN2Q9H9Y4 310 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 MEAF6Q9HAF1 191 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 FBRSL1Q9HCM7 1045 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 HMG20AQ9NP66 347 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 PSME2Q9UL46 239 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 SAC3D1A6NKF1 404 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 PSMD3O43242 534 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 GRIA3P42263 894 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 MERTKQ12866 999 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 TECRLQ5HYJ1 363 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 PERM1Q5SV97 790 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 SPRYD7Q5W111 196 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 TAC4Q86UU9 113 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 ANKRD13BQ86YJ7 626 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 CAMK1DQ8IU85 385 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 C2CD4AQ8NCU7 369 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 DNAJB3Q8WWF6 145 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 SH3YL1Q96HL8 342 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 PCED1BQ96HM7 432 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 PARK7Q99497 189 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 WDR12Q9GZL7 423 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 IL1RL2Q9HB29 575 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 GLOD4Q9HC38 313 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 CD300AQ9UGN4 299 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 ZNF236Q9UL36 1845 aa15.96■□□□□ 0.15
CHMP1A-201ENST00000397901 NRP2O60462 931 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 IPO13O94829 963 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 DNAJB1P25685 340 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 OPRL1P41146 370 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 KPNA2P52292 529 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 MLLT10P55197 1068 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 TPTEP56180 551 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 FKBP1BP68106 108 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 ADAM17P78536 824 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 OCA2Q04671 838 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 NEDD8Q15843 81 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 PCSK7Q16549 785 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 FAM83EQ2M2I3 478 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 UBXN11Q5T124 520 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 INTS11Q5TA45 600 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 ABRAXAS1Q6UWZ7 409 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 DHFR2Q86XF0 187 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 TTC30BQ8N4P2 665 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 AFAP1L2Q8N4X5 818 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 PDZD8Q8NEN9 1154 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 PNPT1Q8TCS8 783 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 RAB2BQ8WUD1 216 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 CANT1Q8WVQ1 401 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 BHMTQ93088 406 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 FEM1CQ96JP0 617 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 FSD1LQ9BXM9 530 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 YTHDF1Q9BYJ9 559 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 RAD21L1Q9H4I0 556 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 EML4Q9HC35 981 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 CNGB3Q9NQW8 809 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 SFMBT1Q9UHJ3 866 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 SARDHQ9UL12 918 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 IPPQ9Y573 584 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 ST14Q9Y5Y6 855 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 MYLKQ15746 1914 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 RRN3P2A6NIE6 340 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 RGS13O14921 159 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 MSI1O43347 362 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 CPNE6O95741 557 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 HSPA8P11142 646 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 ATP6V1B2P21281 511 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 MATN1P21941 496 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 DNAJB2P25686 324 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 CXCR3P49682 368 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 SLC36A3Q495N2 470 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 SAMD4BQ5PRF9 694 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 PPP2R2DQ66LE6 453 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 FAR2Q96K12 515 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 MTG1Q9BT17 334 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 RMND5AQ9H871 391 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 TMEM181Q9P2C4 612 aa15.95■□□□□ 0.14
CHMP1A-201ENST00000397901 PDCD11Q14690 1871 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms