RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TMEM259Q4ZIN3 620 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 BNIPLQ7Z465 357 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 PGAM4Q8N0Y7 254 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 CYGBQ8WWM9 190 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 TREX1Q9NSU2 369 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 PKP3Q9Y446 797 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 BRCA1P38398 1863 aaKnown RBP10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLC7A4O43246 635 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 FGF1P05230 155 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLC10A3P09131 477 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 NCK1P16333 377 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 ADRA1AP35348 466 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 GK3PQ14409 553 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 GRB7Q14451 532 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 SEMA3AQ14563 771 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 POM121L1PQ3SYA9 428 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 TIGD2Q4W5G0 525 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 TMEM207Q6UWW9 146 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 SPPL2CQ8IUH8 684 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 UMODL1-AS1Q8N2C9 162 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 CLDN19Q8N6F1 224 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 TMEM169Q96HH4 297 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 C3orf30Q96M34 536 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 TNKS2Q9H2K2 1166 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 TMEM248Q9NWD8 314 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 PDP2Q9P2J9 529 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 GALPQ9UBC7 116 aa10.42□□□□□ -0.74
CPSF1P1-201ENST00000397477 C15orf38-AP3S2A0A0A6YYH1 394 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 GMNNO75496 209 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 NDST3O95803 873 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 INHAP05111 366 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLC6A4P31645 630 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 CCNG1P51959 295 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 PRKAA2P54646 552 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 DIO3P55073 304 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 KCNK10P57789 538 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 DSC3Q14574 896 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 OR4D1Q15615 310 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 PLA2G4EQ3MJ16 856 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 ARMC12Q5T9G4 340 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 ZBTB49Q6ZSB9 765 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 KIAA0408Q6ZU52 694 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 ARPINQ7Z6K5 226 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 DHFR2Q86XF0 187 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 CLYBLQ8N0X4 340 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 METTL6Q8TCB7 284 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 DDX18Q9NVP1 670 aaKnown RBP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 ZNHIT2Q9UHR6 403 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 EIF2B4Q9UI10 523 aaKnown RBP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 NDUFAF1Q9Y375 327 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 A0A1W2PQ45 241 aaPredicted RBP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 A0A1W2PQY0 241 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 TRIM38O00635 465 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SYNCRIPO60506 623 aaKnown RBP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 OR6B1O95007 311 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 EOMESO95936 686 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 HLA-DPA1P20036 260 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 HMOX2P30519 316 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 DPP6P42658 865 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SH3BP2P78314 561 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 RBBP5Q15291 538 aaKnown RBP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 NR6A1Q15406 480 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 PARP15Q460N3 678 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 TBCELQ5QJ74 424 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 AP1ARQ63HQ0 302 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 RNF111Q6ZNA4 994 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 MILR1Q7Z6M3 343 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 ISCA2Q86U28 154 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SATL1Q86VE3 508 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 LRRC49Q8IUZ0 686 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 STAG3L4Q8TBR4 150 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 BRSK1Q8TDC3 778 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 ULK4Q96C45 1275 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 FUBP3Q96I24 572 aaKnown RBP eCLIP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 FAR2Q96K12 515 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLC25A23Q9BV35 468 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 GPBP1L1Q9HC44 474 aaPredicted RBP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SYTL2Q9HCH5 934 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SPAG4Q9NPE6 437 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 THEGQ9P2T0 379 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 CIDEBQ9UHD4 219 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 LAMA2P24043 3122 aaKnown RBP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 PLXNB2O15031 1838 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 C2orf78A6NCI8 922 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 K7ERQ8 282 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SELPP16109 830 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 UGT1A1P22309 533 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 UGT1A4P22310 534 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 UGT1A3P35503 534 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 UGT1A5P35504 534 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 SQLEQ14534 574 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 IHHQ14623 411 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 NADSYN1Q6IA69 706 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 GPSM1Q86YR5 675 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 CAMK1DQ8IU85 385 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 HERC6Q8IVU3 1022 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 MIER2Q8N344 545 aa10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 ARL14EPQ8N8R7 260 aaPredicted RBP10.41□□□□□ -0.74
CPSF1P1-201ENST00000397477 ST13P5Q8NFI4 369 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms