RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DCLK2Q8N568 766 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 OR2T3Q8NH03 318 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 RPLP0P6Q8NHW5 317 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 KCNK9Q9NPC2 374 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 THEGQ9P2T0 379 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 CA14Q9ULX7 337 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 F5P12259 2224 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 GLYATL1P3A0A0U1RQE8 302 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 PRAMEF1O95521 474 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 S1PR4O95977 384 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 ADH1BP00325 375 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 PRSS56P0CW18 603 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 ATP1A2P50993 1020 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 STC1P52823 247 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 PTPN5P54829 565 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 GYS2P54840 703 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 CACNG1Q06432 222 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 ZDHHC20Q5W0Z9 365 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 ZNF776Q68DI1 518 aaPredicted RBP20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 PSAPL1Q6NUJ1 521 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 CNSTQ6PJW8 725 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 KDM7AQ6ZMT4 941 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 TIFABQ6ZNK6 161 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 PNPLA1Q8N8W4 532 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 HDAC8Q9BY41 377 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 FAM96AQ9H5X1 160 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 FBRSQ9HAH7 460 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 ITM2BQ9Y287 266 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 MTO1Q9Y2Z2 717 aaKnown RBP20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 LRRK1Q38SD2 2015 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 GOLGA8CPA6NN73 597 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 MID1O15344 667 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 RFPL1O75677 317 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 SRP72O76094 671 aaKnown RBP20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 PYGBP11216 843 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 C5AR1P21730 350 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 SPINT3P49223 89 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 COPAP53621 1224 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 PPARDQ03181 441 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 TYSND1Q2T9J0 566 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 ZNF789Q5FWF6 425 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 ZNF852Q6ZMS4 543 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 TAS2R42Q7RTR8 314 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 GPR26Q8NDV2 337 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 SCG3Q8WXD2 468 aaKnown RBP20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 GPR22Q99680 433 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 IL26Q9NPH9 171 aa20.35■□□□□ 0.85
VCPKMT-202ENST00000395860 PLXNA2O75051 1894 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 TPP1O14773 563 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 PFDN6O15212 129 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 SPAG7O75391 227 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 ELFN1P0C7U0 828 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 ITGALP20701 1170 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 P2RY2P41231 377 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 CDKN1CP49918 316 aaPredicted RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 SERPINB8P50452 374 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 CNTN1Q12860 1018 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 HSF5Q4G112 596 aaPredicted RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 AARS2Q5JTZ9 985 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 EOGTQ5NDL2 527 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 HSD11B1LQ7Z5J1 315 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 RAB7BQ96AH8 199 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 ALKBH8Q96BT7 664 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 TCF12Q99081 682 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 ASB8Q9H765 288 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 ARHGEF3Q9NR81 526 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 INTS10Q9NVR2 710 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 FAM95CA0A1B0GW59 222 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 A0A1W2PQF6 199 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 TMEM120BA0PK00 339 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 NEMP1O14524 444 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 GAPDHSO14556 408 aaPredicted RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 ALDOAP04075 364 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 COL9A1P20849 921 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 TYK2P29597 1187 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 TTPAP49638 278 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 RPS14P62263 151 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 PRKCQQ04759 706 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 LIPIQ6XZB0 460 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 SNX20Q7Z614 316 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 GPATCH11Q8N954 259 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 PLEKHG4BQ96PX9 1271 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 WRAP53Q9BUR4 548 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 CNOT10Q9H9A5 744 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 SSU72Q9NP77 194 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 SLC39A10Q9ULF5 831 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 CRYL1Q9Y2S2 319 aa20.34■□□□□ 0.85
VCPKMT-202ENST00000395860 PLXNB3Q9ULL4 1909 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 H0Y858 1186 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 AREL1O15033 823 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 SPINT1O43278 529 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 NDUFS3O75489 264 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 DRD3P35462 400 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 CLCN5P51795 746 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 SLC18A2Q05940 514 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 ILF2Q12905 390 aaKnown RBP20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 CHRNA6Q15825 494 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 RNF187Q5TA31 235 aaPredicted RBP20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 RFLNAQ6ZTI6 216 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms