RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 BPIP17213 487 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 VPS41P49754 854 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 TERF1P54274 439 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 KIAA1024LP59773 190 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 SEMA5AQ13591 1074 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 PTK2BQ14289 1009 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 PTPRCAPQ14761 206 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 HENMT1Q5T8I9 393 aaKnown RBP19.84■□□□□ 0.77
SNCA-203ENST00000394986 CCDC137Q6PK04 289 aaKnown RBP19.84■□□□□ 0.77
SNCA-203ENST00000394986 ENPP7Q6UWV6 458 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 TRIM74Q86UV6 250 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 DEFB124Q8NES8 71 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 ATL2Q8NHH9 583 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 SAP25Q8TEE9 199 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 TSACCQ96A04 125 aaPredicted RBP19.84■□□□□ 0.77
SNCA-203ENST00000394986 PDXPQ96GD0 296 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 RTKNQ9BST9 563 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 FAM83DQ9H4H8 585 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 TRABDQ9H4I3 376 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 UCKL1Q9NWZ5 548 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 ARL5AQ9Y689 179 aa19.84■□□□□ 0.77
SNCA-203ENST00000394986 TP53BP1Q12888 1972 aaPredicted RBP19.84■□□□□ 0.77
SNCA-203ENST00000394986 GOLGA6L10A0A0M3HER8 536 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 FADS2P1A8MWK0 482 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 CACNB4O00305 520 aaPredicted RBP19.83■□□□□ 0.76
SNCA-203ENST00000394986 PDE2AO00408 941 aaPredicted RBP19.83■□□□□ 0.76
SNCA-203ENST00000394986 INPP4BO15327 924 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 CSF2P04141 144 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 TPH1P17752 444 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 CASQ1P31415 396 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 GRIA1P42261 906 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 ID4P47928 161 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 LMAN1P49257 510 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 CDK3Q00526 305 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 SLC14A1Q13336 389 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 MSLNQ13421 630 aaPredicted RBP19.83■□□□□ 0.76
SNCA-203ENST00000394986 TCEA2Q15560 299 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 ALG11Q2TAA5 492 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 NAXDQ8IW45 347 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 SETD7Q8WTS6 366 aaKnown RBP19.83■□□□□ 0.76
SNCA-203ENST00000394986 C16orf45Q96MC5 204 aaPredicted RBP19.83■□□□□ 0.76
SNCA-203ENST00000394986 WDR92Q96MX6 357 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 SRPK1Q96SB4 655 aaKnown RBP19.83■□□□□ 0.76
SNCA-203ENST00000394986 TEX101Q9BY14 249 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 FGF22Q9HCT0 170 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 HACD3Q9P035 362 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 KCTD3Q9Y597 815 aa19.83■□□□□ 0.76
SNCA-203ENST00000394986 E7EVH7 732 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 PCDHGA12O60330 932 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 PIAS2O75928 621 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 MYCLP1P12525 358 aaPredicted RBP19.82■□□□□ 0.76
SNCA-203ENST00000394986 NME1P15531 152 aaKnown RBP19.82■□□□□ 0.76
SNCA-203ENST00000394986 JUNDP17535 347 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 SDHBP21912 280 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 HTR1BP28222 390 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 HMGCLP35914 325 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 BASP1P80723 227 aaKnown RBP19.82■□□□□ 0.76
SNCA-203ENST00000394986 DOK6Q6PKX4 331 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 ADAMTSL4Q6UY14 1074 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 KANSL1Q7Z3B3 1105 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 RD3Q7Z3Z2 195 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 PIP4P1Q86T03 277 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 PHACTR4Q8IZ21 702 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 OR52K1Q8NGK4 314 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 PTCD2Q8WV60 388 aaKnown RBP19.82■□□□□ 0.76
SNCA-203ENST00000394986 OR1E3Q8WZA6 343 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 LRRC45Q96CN5 670 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 DDX47Q9H0S4 455 aaKnown RBP19.82■□□□□ 0.76
SNCA-203ENST00000394986 ARNT2Q9HBZ2 717 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 MRPL40Q9NQ50 206 aaKnown RBP19.82■□□□□ 0.76
SNCA-203ENST00000394986 PHPT1Q9NRX4 125 aaPredicted RBP19.82■□□□□ 0.76
SNCA-203ENST00000394986 IL17CQ9P0M4 197 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 KLQ9UEF7 1012 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 PCDHGB2Q9Y5G2 931 aa19.82■□□□□ 0.76
SNCA-203ENST00000394986 SPTBN4Q9H254 2564 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 RGSL1A5PLK6 1076 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 YKT6O15498 198 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 PSMD3O43242 534 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 KRT14P02533 472 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 APRTP07741 180 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 KCNA4P22459 653 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 DGKAP23743 735 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 HID1Q8IV36 788 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 RAVER1Q8IY67 606 aaKnown RBP19.81■□□□□ 0.76
SNCA-203ENST00000394986 OR56A4Q8NGH8 313 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 TRIM44Q96DX7 344 aaPredicted RBP19.81■□□□□ 0.76
SNCA-203ENST00000394986 SPATA16Q9BXB7 569 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 SUDS3Q9H7L9 328 aaPredicted RBP19.81■□□□□ 0.76
SNCA-203ENST00000394986 APOBEC3BQ9UH17 382 aaKnown RBP19.81■□□□□ 0.76
SNCA-203ENST00000394986 MOSPD1Q9UJG1 213 aa19.81■□□□□ 0.76
SNCA-203ENST00000394986 ASCC3Q8N3C0 2202 aaKnown RBP19.81■□□□□ 0.76
SNCA-203ENST00000394986 GIPC1O14908 333 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 HOXC4P09017 264 aaPredicted RBP19.8■□□□□ 0.76
SNCA-203ENST00000394986 TEAD1P28347 426 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 POLD2P49005 469 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 FNTAP49354 379 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 DCDC1P59894 354 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 SRP54P61011 504 aaKnown RBP19.8■□□□□ 0.76
SNCA-203ENST00000394986 PPARDQ03181 441 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 GPS1Q13098 491 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms