RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FBXO30Q8TB52 745 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 CXorf21Q9HAI6 301 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 MAGEL2Q9UJ55 1249 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 PADI4Q9UM07 663 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 MYO1DO94832 1006 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 F2P00734 622 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 UMPSP11172 480 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 TTPAP49638 278 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 TUBB3Q13509 450 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 HORMAD1Q86X24 394 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 AADATQ8N5Z0 425 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 MFSD1Q9H3U5 465 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 KIAA1217Q5T5P2 1943 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 TSPAN3O60637 253 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 GUCA1CO95843 209 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 GOT2P00505 430 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 ITGALP20701 1170 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 XPAP23025 273 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 CD52P31358 61 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 VEPH1Q14D04 833 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 ZBTB6Q15916 424 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 DDR2Q16832 855 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 MYLK3Q32MK0 819 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 ERMP1Q7Z2K6 904 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 FAM9CQ8IZT9 166 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 BTN2A3PQ96KV6 586 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 RMND5AQ9H871 391 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 HS6ST1O60243 411 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 SNAI1O95863 264 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 HDCP19113 662 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 CCNA2P20248 432 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 CDH15P55291 814 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 IL5RAQ01344 420 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 MERTKQ12866 999 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 PPP1R3AQ16821 1122 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 STK40Q8N2I9 435 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 BORCS5Q969J3 196 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 PLEKHG4BQ96PX9 1271 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 OSBPL6Q9BZF3 934 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 OR51F1A6NGY5 319 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 KCNH1O95259 989 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 SIX3O95343 332 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 NDST3O95803 873 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 ITGBL1O95965 494 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 ANXA6P08133 673 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PCNAP12004 261 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 TMED10P49755 219 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 POLR2JP52435 117 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 HUNKP57058 714 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 TUBA4AP68366 448 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PARP15Q460N3 678 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 GPRIN1Q7Z2K8 1008 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 OFCC1Q8IZS5 231 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 GIPC3Q8TF64 312 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PSMG2Q969U7 264 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PRICKLE1Q96MT3 831 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 HPS4Q9NQG7 708 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 HTRA2O43464 458 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 MT-ND1P03886 318 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 OR4Q2P0C623 313 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 ZNF7P17097 686 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CLK1P49759 484 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CCT8P50990 548 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 YBEYP58557 167 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PFKPQ01813 784 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PLCL1Q15111 1095 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 LINGO1Q96FE5 620 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 TBCDQ9BTW9 1192 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PARVBQ9HBI1 364 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 FBRSL1Q9HCM7 1045 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 WDR6Q9NNW5 1121 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CD320Q9NPF0 282 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 ZMYM5Q9UJ78 669 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PSME4Q14997 1843 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CFAP99D6REC4 459 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 H0YJX3 145 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 PDLIM1O00151 329 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 RGS14O43566 566 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 GPR32O75388 356 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CYBBP04839 570 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 ITGB6P18564 788 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 LPOP22079 712 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 SLC26A3P40879 764 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 ACADVLP49748 655 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CDK9P50750 372 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 RHOAP61586 193 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 HPCAP84074 193 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 FBXO48Q5FWF7 155 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 GLYATQ6IB77 296 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CLEC14AQ86T13 490 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 P3H2Q8IVL5 708 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 ZFP28Q8NHY6 868 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CASP10Q92851 521 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 ACTR8Q9H981 624 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 CNOT11Q9UKZ1 510 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 USP3Q9Y6I4 520 aa11.63□□□□□ -0.55
UBE2D3-209ENST00000394804 WDR90Q96KV7 1748 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 NPEPPSL1A6NEC2 478 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms