RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 WBP1LQ9NX94 342 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 ST3GAL5Q9UNP4 418 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 ARL5CA6NH57 179 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 MOXD2PA6NHM9 499 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 FXYD1O00168 92 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC7A4O43246 635 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 CDK14O94921 469 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 ATP6V0D1P61421 351 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 GRB7Q14451 532 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 LPIN1Q14693 890 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 INTS11Q5TA45 600 aaKnown RBP18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 SPPL2CQ8IUH8 684 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC15A3Q8IY34 581 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 CBR4Q8N4T8 237 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 OR52K2Q8NGK3 314 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 MFSD1Q9H3U5 465 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 EGFL7Q9UHF1 273 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 AURKCQ9UQB9 309 aa18.33■□□□□ 0.52
PCDHA1-202ENST00000394633 TDRD15B5MCY1 1934 aaKnown RBP18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 DHRS12A0PJE2 317 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 MROH6A6NGR9 719 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 LRRC14BA6NHZ5 514 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 TRIM64CA6NLI5 447 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 AQP12BA6NM10 295 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 C9JVG2 144 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 MMP2P08253 660 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 ODC1P11926 461 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC26A3P40879 764 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 BRCC3P46736 316 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 GALK1P51570 392 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 ADARP55265 1226 aaKnown RBP18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 FOXA1P55317 472 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 ITKQ08881 620 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 TRIM71Q2Q1W2 868 aaKnown RBP18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 VPS26BQ4G0F5 336 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 KCTD21Q4G0X4 260 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 IL31Q6EBC2 164 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 PHYKPLQ8IUZ5 450 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 AQP12AQ8IXF9 295 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 PACRGLQ8N7B6 248 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 OR10T2Q8NGX3 314 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 TRPC4APQ8TEL6 797 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 KLHL5Q96PQ7 755 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 HOPXQ9BPY8 73 aaPredicted RBP18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 DSEQ9UL01 958 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 NOD1Q9Y239 953 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 CRYL1Q9Y2S2 319 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 NDUFAF1Q9Y375 327 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 KCTD3Q9Y597 815 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 ANKRD36A6QL64 1941 aa18.32■□□□□ 0.52
PCDHA1-202ENST00000394633 TTC24A2A3L6 582 aaPredicted RBP18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 FAM149AA5PLN7 773 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 J3KR12 359 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 SIX3O95343 332 aaPredicted RBP18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC4A1P02730 911 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 CD1DP15813 335 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 DSC2Q02487 901 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 CAPRIN1Q14444 709 aaKnown RBP18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 AGMOQ6ZNB7 445 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 SCD5Q86SK9 330 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 PTGR2Q8N8N7 351 aaPredicted RBP18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 BIRC8Q96P09 236 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 STARD7Q9NQZ5 370 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 AGPAT4Q9NRZ5 378 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 RGS18Q9NS28 235 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 CMTM6Q9NX76 183 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 GMEB1Q9Y692 573 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 PIP5K1BO14986 540 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 HSD17B1P14061 328 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 MYF6P23409 242 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC10A7Q0GE19 358 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 LCN8Q6JVE9 175 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 PRMT9Q6P2P2 845 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 ZNF549Q6P9A3 640 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 CAMK1DQ8IU85 385 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 LRRC49Q8IUZ0 686 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 MINDY1Q8N5J2 469 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 TWIST2Q8WVJ9 160 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 MID1IP1Q9NPA3 183 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 PAK6Q9NQU5 681 aaPredicted RBP18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 LMCD1Q9NZU5 365 aa18.31■□□□□ 0.52
PCDHA1-202ENST00000394633 WASH4PA8MWX3 477 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 FGF4P08620 206 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 CHRM3P20309 590 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 FDXRP22570 491 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 CD52P31358 61 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC5A3P53794 718 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 TIAL1Q01085 375 aaKnown RBP eCLIP18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 INPP5AQ14642 412 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 SIRPB2Q5JXA9 342 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 MIER2Q8N344 545 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 ZNF786Q8N393 782 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 RYBPQ8N488 228 aaPredicted RBP18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 ADI1Q9BV57 179 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 TRIM15Q9C019 465 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 NMUR1Q9HB89 426 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 TUBA8Q9NY65 449 aaPredicted RBP18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 GBF1Q92538 1859 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms