RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MAPK10P53779 464 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 GPLD1P80108 840 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 LRP8Q14114 963 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 SMTNL2Q2TAL5 461 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 RAET1GQ6H3X3 334 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 ZFAND4Q86XD8 727 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 TAAR9Q96RI9 348 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 PCDH18Q9HCL0 1135 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 PDP2Q9P2J9 529 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 SLC28A2O43868 658 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 SOD1P00441 154 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 AK4P27144 223 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 GPR1P46091 355 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 SLC25A11Q02978 314 aaKnown RBP17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 KCNC4Q03721 635 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 AMZ1Q400G9 498 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 SLC30A9Q6PML9 568 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 NRSN1Q8IZ57 195 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 AGBL5Q8NDL9 886 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 CCDC112Q8NEF3 446 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 HSPH1Q92598 858 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 SYN2Q92777 582 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 NUDT22Q9BRQ3 303 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 ARHGAP9Q9BRR9 750 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 DDA1Q9BW61 102 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 POLR1EQ9GZS1 481 aaKnown RBP17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 HAUS2Q9NVX0 235 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 MYO1AQ9UBC5 1043 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 IP6K2Q9UHH9 426 aa17.42■□□□□ 0.38
SNRPA1-202ENST00000394082 IGHV1OR21-1A0A087WYE8 117 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 A0A0J9YYE9 177 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 PPM1DO15297 605 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 WISP1O95388 367 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 TRBC1P01850 177 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 FGF3P11487 239 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 TCF4P15884 667 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 ITGB6P18564 788 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 IL4RP24394 825 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 MAXP61244 160 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 RPL26P61254 145 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 PTSQ03393 145 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 SRSF6Q13247 344 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 BIRC2Q13490 618 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 NR1I3Q14994 352 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 ANO6Q4KMQ2 910 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 PYCR3Q53H96 274 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 DENND2CQ68D51 928 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 TSPAN33Q86UF1 283 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 MAML1Q92585 1016 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 EXTL1Q92935 676 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 AP2M1Q96CW1 435 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 COX14Q96I36 57 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 OR2M4Q96R27 311 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 ASPSCR1Q9BZE9 553 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 FAM117AQ9C073 453 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 ABCG8Q9H221 673 aa17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 RPL26L1Q9UNX3 145 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-202ENST00000394082 TLN1Q9Y490 2541 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 B4E171 279 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 PDHA1P08559 390 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 THRAP10827 490 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 CCL4P13236 92 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 GARSP41250 739 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 TSPAN7P41732 249 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 ACTR1BP42025 376 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 POLD2P49005 469 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 CSRP3P50461 194 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 ATP1A2P50993 1020 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 ACTR1AP61163 376 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 GALNT2Q10471 571 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 NFATC3Q12968 1075 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 HGSNATQ68CP4 663 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 LRRC66Q68CR7 880 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 TIGD7Q6NT04 549 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 TMEM71Q6P5X7 295 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 EXD1Q8NHP7 514 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 PTCD2Q8WV60 388 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 CCDC74BQ96LY2 380 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 TSGA13Q96PP4 275 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 LYSMD1Q96S90 227 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 VPS18Q9P253 973 aa17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 HEMK1Q9Y5R4 338 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-202ENST00000394082 UBR5O95071 2799 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 A0A1W2PQJ5 194 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 GOLGA6CA6NDK9 693 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 GOLGA6BA6NDN3 693 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 MATN3O15232 486 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 CYP1A2P05177 515 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 GOLGA6DP0CG33 693 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 SKILP12757 684 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 CA4P22748 312 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 CSTF2P33240 577 aaKnown RBP eCLIP17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 ARSDP51689 593 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 STC1P52823 247 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 RAB15P59190 212 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 PAFAH1B3Q15102 231 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 TBR1Q16650 682 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 TXNRD3NBQ6F5E7 133 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 VASH2Q86V25 355 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 SFRP1Q8N474 314 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms