RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 CCDC162PA2VCL2 907 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 NPEPPSL1A6NEC2 478 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 ANKDD1BA6NHY2 528 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 OR2AG2A6NM03 316 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 FSBPO95073 299 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 GJB5O95377 273 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 PABPC1P11940 636 aaKnown RBP10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 VAV1P15498 845 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 NEK3P51956 506 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 WDR4P57081 412 aaKnown RBP10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 PAGE2BQ5JRK9 111 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 WASHC2DQ5SRD0 308 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 ARHGAP36Q6ZRI8 547 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 UBE2R2Q712K3 238 aaPredicted RBP10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 DHFR2Q86XF0 187 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 RGL4Q8IZJ4 473 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 FIG4Q92562 907 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 SLC2A13Q96QE2 648 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 TCF12Q99081 682 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 TSC22D3Q99576 134 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 C1orf50Q9BV19 199 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 CDH19Q9H159 772 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 FETUBQ9UGM5 382 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 GPSM3Q9Y4H4 160 aa10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 N4BP2Q86UW6 1770 aaPredicted RBP10.63□□□□□ -0.71
MTHFD2-201ENST00000394053 TCEA3O75764 348 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 WDR47O94967 919 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 OAZ2O95190 189 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 PFKMP08237 780 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SNRPB2P08579 225 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 COX4I1P13073 169 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 MAPK9P45984 424 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 KPNB1Q14974 876 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SAMD4BQ5PRF9 694 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TBCELQ5QJ74 424 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 MFSD4BQ5TF39 518 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.62□□□□□ -0.711e-7■■□□□ 13.7
MTHFD2-201ENST00000394053 ZBTB49Q6ZSB9 765 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 ZSCAN18Q8TBC5 510 aaPredicted RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 REPS1Q96D71 796 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SYT11Q9BT88 431 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 CAAP1Q9H8G2 361 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 HPS4Q9NQG7 708 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TLR9Q9NR96 1032 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TRPC4Q9UBN4 977 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TRAFD1O14545 582 aaPredicted RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 RNASEH2AO75792 299 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 PRKCGP05129 697 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 ATP6V1B2P21281 511 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 HNF4AP41235 474 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TGM3Q08188 693 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 LRRC23Q53EV4 343 aaPredicted RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 CCDC157Q569K6 752 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 GRASPQ7Z6J2 395 aaPredicted RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SERPINA9Q86WD7 417 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 RAVER1Q8IY67 606 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 COLGALT2Q8IYK4 626 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 KLHL23Q8NBE8 558 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 C3orf58Q8NDZ4 430 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 ST13P5Q8NFI4 369 aaPredicted RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 MAGED4Q96JG8 741 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 ZNF599Q96NL3 588 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TBCDQ9BTW9 1192 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 USP29Q9HBJ7 922 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 LBX1P52954 281 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 RPL38P63173 70 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 DSG1Q02413 1049 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 DMC1Q14565 340 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 XKR6Q5GH73 641 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 CAPRIN2Q6IMN6 1127 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 CLNKQ7Z7G1 428 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 CPNE9Q8IYJ1 553 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 HEXDCQ8WVB3 486 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SIGLEC10Q96LC7 697 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SMG9Q9H0W8 520 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 MMADHCQ9H3L0 296 aaPredicted RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SSU72Q9NP77 194 aaKnown RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 FNIP2Q9P278 1114 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 VPS51Q9UID3 782 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 COCHO43405 550 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 NTRK1P04629 796 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SLC35G4P0C7Q5 338 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 HTR1BP28222 390 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 PSMD8P48556 350 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 POLD2P49005 469 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 SLC10A2Q12908 348 aaPredicted RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 PRKG2Q13237 762 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TAF1AQ15573 450 aaPredicted RBP10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 CLLU1OSQ5K130 101 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 WLSQ5T9L3 541 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 VWA5B1Q5TIE3 1220 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TMEM154Q6P9G4 183 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 ZNF366Q8N895 744 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 DNAJB14Q8TBM8 379 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 CDKN2AIPNLQ96HQ2 116 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 KCTD5Q9NXV2 234 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 TMCO1Q9UM00 188 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 GRIN2DO15399 1336 aa10.62□□□□□ -0.71
MTHFD2-201ENST00000394053 DDX60LQ5H9U9 1706 aaKnown RBP10.61□□□□□ -0.71
MTHFD2-201ENST00000394053 CEP290O15078 2479 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms