RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TMEM27Q9HBJ8 222 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ANXA2P2A6NMY6 339 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 CLDN25C9JDP6 229 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 TOP3BO95985 862 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ANXA2P07355 339 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 EPCAMP16422 314 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 PNLIPRP1P54315 467 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 SNAP47Q5SQN1 464 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 FRRS1Q6ZNA5 592 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 C1orf186Q6ZWK4 172 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 UNKLQ9H9P5 680 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 CPA4Q9UI42 421 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 DUSP10Q9Y6W6 482 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 TRIM64CA6NLI5 447 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 FADS2P1A8MWK0 482 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 C9P02748 559 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 CXCL8P10145 99 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 OR3A3P47888 321 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 OR3A2P47893 321 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 PUS10Q3MIT2 529 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 OR2L8Q8NGY9 312 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 CXorf40BQ96DE9 158 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ADARB2Q9NS39 739 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 C2orf71A6NGG8 1288 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 PGRP06401 933 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ATP6V0D1P61421 351 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 KLHL22Q53GT1 634 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 DGLUCYQ7Z3D6 616 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 TRAPPC5Q8IUR0 188 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 OR8H3Q8N146 312 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 UBR7Q8N806 425 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 LRRC46Q96FV0 321 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 EPHX2P34913 555 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 SYCE2Q6PIF2 218 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 SEMA4DQ92854 862 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 LGR4Q9BXB1 951 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 PQBP1O60828 265 aaKnown RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 FSBPO95073 299 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 RRP1BQ14684 758 aaKnown RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 EIPR1Q53HC9 387 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 PGM2L1Q6PCE3 622 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 HTR3CQ8WXA8 447 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 PSKH2Q96QS6 385 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 SEC14L4Q9UDX3 406 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 BARX2Q9UMQ3 279 aaPredicted RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 DCXO43602 365 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 LTFP02788 710 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 FDPSP14324 419 aaKnown RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 SREBF1P36956 1147 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF268Q14587 947 aaPredicted RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF470Q6ECI4 717 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 CELF6Q96J87 481 aaKnown RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 FDXACB1Q9BRP7 624 aaPredicted RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 GHRLQ9UBU3 117 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF451Q9Y4E5 1061 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 TIMM13Q9Y5L4 95 aaPredicted RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 CSN2P05814 226 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 PTPN5P54829 565 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 PRR5P85299 388 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 DHDDSQ86SQ9 333 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 CEP41Q9BYV8 373 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 TMPRSS11EQ9UL52 423 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 TRMUO75648 421 aaKnown RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 FGF19O95750 216 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 LTA4HP09960 611 aaKnown RBP14.71□□□□□ -0.05
CCDC50-201ENST00000392455 ATP4AP20648 1035 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 MMP13P45452 471 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 SULT2A1Q06520 285 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 MPPE1Q53F39 396 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 TAPT1Q6NXT6 567 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 TMC7Q7Z402 723 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 SUSD6Q92537 303 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 PTPRHQ9HD43 1115 aa14.71□□□□□ -0.05
CCDC50-201ENST00000392455 M0R036 132 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 APLP1P51693 650 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 ERVK-24P63145 666 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 IRF8Q02556 426 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 CRTC3Q6UUV7 619 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 SAMD14Q8IZD0 417 aaPredicted RBP14.71□□□□□ -0.06
CCDC50-201ENST00000392455 CXorf40AQ8TE69 158 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 COL26A1Q96A83 441 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 POMKQ9H5K3 350 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 MAFFQ9ULX9 164 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 ARID1BQ8NFD5 2236 aaPredicted RBP14.71□□□□□ -0.06
CCDC50-201ENST00000392455 C1GALT1C1Q96EU7 318 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 PFDN5Q99471 154 aa14.71□□□□□ -0.06
CCDC50-201ENST00000392455 H7C2Y5 167 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 SERPINA6P08185 405 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 SAGP10523 405 aaPredicted RBP14.7□□□□□ -0.06
CCDC50-201ENST00000392455 MARSP56192 900 aaKnown RBP14.7□□□□□ -0.06
CCDC50-201ENST00000392455 NRF1Q16656 503 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 FBXO47Q5MNV8 452 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 SLCO6A1Q86UG4 719 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 ZZZ3Q8IYH5 903 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 ZSWIM2Q8NEG5 633 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 COPS7AQ9UBW8 275 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 MID1O15344 667 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 MICAL2O94851 1124 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 ITGA2BP08514 1039 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 SOX10P56693 466 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms