RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TAGAPQ8N103 731 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 PACRGLQ8N7B6 248 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ARRDC4Q8NCT1 418 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 FBXL13Q8NEE6 735 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 OR8K3Q8NH51 312 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 IL31RAQ8NI17 732 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 PPP1R13LQ8WUF5 828 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 SHC3Q92529 594 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GJA10Q969M2 543 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 HSFY1Q96LI6 401 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 TBATAQ96M53 351 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 SPOCK3Q9BQ16 436 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 UCK2Q9BZX2 261 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 NGRNQ9NPE2 291 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CD320Q9NPF0 282 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 KCTD5Q9NXV2 234 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 TEKT2Q9UIF3 430 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 FBXO5Q9UKT4 447 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 FARP1Q9Y4F1 1045 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 KLF2Q9Y5W3 355 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 TP53BP1Q12888 1972 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 DNAJC25-GNG10A0A024R161 153 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 TCRBV9S1A1TA0A576 114 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 KRT87PA6NCN2 255 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 SULT1B1O43704 296 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GRIN3BO60391 1043 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF623O75123 536 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 MAFO75444 373 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 KRT37O76014 449 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 HMGN1P05114 100 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 FGF3P11487 239 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GLDCP23378 1020 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GTF2E2P29084 291 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 VGLL4Q14135 290 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ADPRMQ3LIE5 342 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 FASTKD1Q53R41 847 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 INTS11Q5TA45 600 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 BEND5Q7L4P6 421 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 HORMAD1Q86X24 394 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CAMK1DQ8IU85 385 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 NAT16Q8N8M0 369 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ZBTB44Q8NCP5 570 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 URGCPQ8TCY9 931 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 SOX17Q9H6I2 414 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 WRAP73Q9P2S5 460 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GABBR1Q9UBS5 961 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CNTN6Q9UQ52 1028 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 KCNE2Q9Y6J6 123 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 TCRBV3S1A0A5B6 114 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 RGSL1A5PLK6 1076 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ZBBXA8MT70 800 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 E7ESA3 106 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 TRIM38O00635 465 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PGRP06401 933 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 HOXD4P09016 255 aaPredicted RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 IL7P13232 177 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ALDH4A1P30038 563 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 UGT2B10P36537 528 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 GP5P40197 560 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SERPINB10P48595 397 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CYP24A1Q07973 514 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SNRNP35Q16560 246 aaKnown RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 FAM187BQ17R55 369 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CBWD6Q4V339 395 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CBWD3Q5JTY5 395 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF484Q5JVG2 852 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CBWD5Q5RIA9 395 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 LDLRAD1Q5T700 205 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 C15orf39Q6ZRI6 1047 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CDH24Q86UP0 819 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 IGDCC3Q8IVU1 814 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SFRP1Q8N474 314 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 OR7A2PQ8NGA2 310 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PROX1Q92786 737 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 FYTTD1Q96QD9 318 aaKnown RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 KATNAL1Q9BW62 490 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 DGCR6LQ9BY27 220 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CD93Q9NPY3 652 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ADGRE2Q9UHX3 823 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 IPPQ9Y573 584 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 F8W810 466 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 I3L521 148 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 M0R3G1 203 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PLD2O14939 933 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PPM1BO75688 479 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SLC4A1P02730 911 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 WEE2P0C1S8 567 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SLURP2P0DP57 97 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 NUMBP49757 651 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 RPL10AP62906 217 aaKnown RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PTP4A2Q12974 167 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 RIN1Q13671 783 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 GALEQ14376 348 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 KCTD2Q14681 263 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 RFTN1Q14699 578 aaPredicted RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 GRM7Q14831 915 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 EMC2Q15006 297 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 DDR2Q16832 855 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SLC9B1Q4ZJI4 515 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CYBRD1Q53TN4 286 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms