RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SMIM14Q96QK8 99 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 FRMD8Q9BZ67 464 aaPredicted RBP16.77■□□□□ 0.28
HMGN4-201ENST00000377575 TMEM168Q9H0V1 697 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 ABCG8Q9H221 673 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 CARS2Q9HA77 564 aaKnown RBP16.77■□□□□ 0.28
HMGN4-201ENST00000377575 GLOD4Q9HC38 313 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 PKD2L2Q9NZM6 624 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 SAE1Q9UBE0 346 aaPredicted RBP16.77■□□□□ 0.28
HMGN4-201ENST00000377575 GULP1Q9UBP9 304 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 REXO2Q9Y3B8 237 aaKnown RBP16.77■□□□□ 0.28
HMGN4-201ENST00000377575 APC2O95996 2303 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 ARHGEF17Q96PE2 2063 aaPredicted RBP16.76■□□□□ 0.27
HMGN4-201ENST00000377575 CCDC66A2RUB6 948 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 HACD1B0YJ81 288 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 PJA2O43164 708 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 CEACAM5P06731 702 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 ILF3Q12906 894 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGN4-201ENST00000377575 PCSK7Q16549 785 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 CCDC181Q5TID7 509 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 B4GALNT4Q76KP1 1039 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 ZC3H18Q86VM9 953 aaKnown RBP16.76■□□□□ 0.27
HMGN4-201ENST00000377575 KIAA1524Q8TCG1 905 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 HAUS1Q96CS2 278 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 TEKT5Q96M29 485 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 QKIQ96PU8 341 aaKnown RBP eCLIP16.76■□□□□ 0.276e-7■■■■■ 33.5
HMGN4-201ENST00000377575 VAT1Q99536 393 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 GSDMCQ9BYG8 508 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 SLC17A4Q9Y2C5 497 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 PCDHA3Q9Y5H8 950 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 AK5Q9Y6K8 562 aa16.76■□□□□ 0.27
HMGN4-201ENST00000377575 RGSL1A5PLK6 1076 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 APOC4-APOC2K7ER74 178 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 TAF4O00268 1085 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 CSO75390 466 aaKnown RBP16.75■□□□□ 0.27
HMGN4-201ENST00000377575 TCEA3O75764 348 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 SOD1P00441 154 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 APOC2P02655 101 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 IVLP07476 585 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 CTNNA2P26232 953 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 CETN2P41208 172 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 TNNT3P45378 269 aaPredicted RBP16.75■□□□□ 0.27
HMGN4-201ENST00000377575 GNPDA1P46926 289 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 CDK18Q07002 472 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 ADCY2Q08462 1091 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 PEX6Q13608 980 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 RTP5Q14D33 572 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 PERM1Q5SV97 790 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 CCDC70Q6NSX1 233 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 DOK6Q6PKX4 331 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 RBM44Q6ZP01 1051 aaKnown RBP16.75■□□□□ 0.27
HMGN4-201ENST00000377575 RFLNAQ6ZTI6 216 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 BBS12Q6ZW61 710 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 TMEM139Q8IV31 216 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 SPC24Q8NBT2 197 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 FAM46DQ8NEK8 389 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 SCAMP4Q969E2 229 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 TADA1Q96BN2 335 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 HIC2Q96JB3 615 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 TRIB3Q96RU7 358 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 CCDC3Q9BQI4 270 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 FERMT1Q9BQL6 677 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 LACRTQ9GZZ8 138 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 CDH19Q9H159 772 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 SUDS3Q9H7L9 328 aaPredicted RBP16.75■□□□□ 0.27
HMGN4-201ENST00000377575 TRNAU1APQ9NX07 287 aaKnown RBP16.75■□□□□ 0.27
HMGN4-201ENST00000377575 KLHL8Q9P2G9 620 aaPredicted RBP16.75■□□□□ 0.27
HMGN4-201ENST00000377575 SUFUQ9UMX1 484 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 EFR3BQ9Y2G0 817 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 DUSP10Q9Y6W6 482 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 PKD1L2Q7Z442 2459 aa16.75■□□□□ 0.27
HMGN4-201ENST00000377575 B4DGG1 531 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 MT-CYBP00156 380 aaPredicted RBP16.74■□□□□ 0.27
HMGN4-201ENST00000377575 PTPN7P35236 360 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 SPINT3P49223 89 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 RWDD2BP57060 319 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 WASHC5Q12768 1159 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 KIF5AQ12840 1032 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 XRCC4Q13426 336 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 SPIDRQ14159 915 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 LYSMD3Q7Z3D4 306 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 KDELC2Q7Z4H8 507 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 SYCE1Q8N0S2 351 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 GPR156Q8NFN8 814 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 SPATA22Q8NHS9 363 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 GPBAR1Q8TDU6 330 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 HTR3CQ8WXA8 447 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 CCDC74AQ96AQ1 378 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 GRAMD1AQ96CP6 724 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 SRPK1Q96SB4 655 aaKnown RBP16.74■□□□□ 0.27
HMGN4-201ENST00000377575 RIOK2Q9BVS4 552 aaKnown RBP16.74■□□□□ 0.27
HMGN4-201ENST00000377575 HEMGNQ9BXL5 484 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 DPEP2Q9H4A9 486 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 SYNDIG1Q9H7V2 258 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 ZFYVE1Q9HBF4 777 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 MAGEE1Q9HCI5 957 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 RAD18Q9NS91 495 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 FAM153AQ9UHL3 310 aa16.74■□□□□ 0.27
HMGN4-201ENST00000377575 MACROD2A1Z1Q3 448 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 GRID2IPA4D2P6 1211 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 PMPCBO75439 489 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms