RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 KIAA0408Q6ZU52 694 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 CPSF7Q8N684 471 aaKnown RBP12.9□□□□□ -0.34
USP11-204ENST00000377107 FAM45AQ8TCE6 357 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 GALPQ9UBC7 116 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 TLR6Q9Y2C9 796 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 PLOD2O00469 737 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 KCNK10P57789 538 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 XIAPP98170 497 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 FOXD4Q12950 439 aaPredicted RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 DYNC1I2Q13409 638 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 FAM117BQ6P1L5 589 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 ZNF549Q6P9A3 640 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 TTC33Q6PID6 262 aaPredicted RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 PRSS55Q6UWB4 352 aaPredicted RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 FRA10AC1Q70Z53 315 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 CNTN4Q8IWV2 1026 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 FNDC5Q8NAU1 212 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 SIDT2Q8NBJ9 832 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 ZFP28Q8NHY6 868 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 HMGCLL1Q8TB92 370 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 DGCR14Q96DF8 476 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 BTN2A3PQ96KV6 586 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 HGH1Q9BTY7 390 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 TM6SF2Q9BZW4 377 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 ATP13A1Q9HD20 1204 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 TLR8Q9NR97 1041 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 ZDHHC7Q9NXF8 308 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 PLXNA1Q9UIW2 1896 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 ACOT8O14734 319 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 TNFRSF10BO14763 440 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 SLC7A4O43246 635 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 CHEK2O96017 543 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 ATP6V1B2P21281 511 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 HERVK_113P63132 956 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 RAD51Q06609 339 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 PLCL1Q15111 1095 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 CST9Q5W186 159 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 METTL25Q8N6Q8 603 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 ZIC5Q96T25 663 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 ERVK-6Q9BXR3 956 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 TAS2R13Q9NYV9 303 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 USP22Q9UPT9 525 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 NEU3Q9UQ49 428 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 CROCCQ5TZA2 2017 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 ARHGAP10A1A4S6 786 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 STX7O15400 261 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 HNRNPRO43390 633 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 LDB2O43679 373 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 TPD52P55327 224 aaPredicted RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 CLCQ05315 142 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 PRKCZQ05513 592 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 PPP1R8Q12972 351 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 ANKS6Q68DC2 871 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 CHST15Q7LFX5 561 aaPredicted RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 ZNF598Q86UK7 904 aaKnown RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 MAGEE2Q8TD90 523 aaPredicted RBP12.89□□□□□ -0.35
USP11-204ENST00000377107 CDKN2AIPNLQ96HQ2 116 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 GPR62Q9BZJ7 368 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 LRFN2Q9ULH4 789 aa12.89□□□□□ -0.35
USP11-204ENST00000377107 FFAR3O14843 346 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 CASQ2O14958 399 aaPredicted RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 GPR42O15529 346 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 ZNF23P17027 643 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 LBPP18428 481 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 CAPN3P20807 821 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 RGRP47804 291 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 OXCT1P55809 520 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 IL1RL1Q01638 556 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 RHDQ02161 417 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 IKBKEQ14164 716 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 LRRC23Q53EV4 343 aaPredicted RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 KIAA1841Q6NSI8 718 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 MSANTD2Q6P1R3 559 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 PPM1MQ96MI6 270 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 EGFL8Q99944 293 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 MRPL40Q9NQ50 206 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 EIF2B4Q9UI10 523 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 FKBPLQ9UIM3 349 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 TRMT6Q9UJA5 497 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 RAB26Q9ULW5 256 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 SPO11Q9Y5K1 396 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 COMMD3-BMI1R4GMX3 469 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 A0A0G2JMZ2 1700 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 PLXNB2O15031 1838 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 DHRS12A0PJE2 317 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 SYNCRIPO60506 623 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 FOXD2O60548 495 aaPredicted RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 GNAO1P09471 354 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 PABPC4LP0CB38 370 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 CD1DP15813 335 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 PSMA4P25789 261 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 NFKBIAP25963 317 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms