RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 DMC1Q14565 340 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CFAP157Q5JU67 520 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 DGKKQ5KSL6 1271 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PSAPL1Q6NUJ1 521 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 C22orf39Q6P5X5 142 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TRIM67Q6ZTA4 783 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SPRED2Q7Z698 418 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TMEM25Q86YD3 366 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PIANPQ8IYJ0 282 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 RHEBL1Q8TAI7 183 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 IRF7Q92985 503 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SAMD11Q96NU1 681 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TUBGCP5Q96RT8 1024 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 BTBD10Q9BSF8 475 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GPR63Q9BZJ6 419 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CCDC68Q9H2F9 335 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SYTL2Q9HCH5 934 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TAS2R13Q9NYV9 303 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 MARK1Q9P0L2 795 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PLXNB3Q9ULL4 1909 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 LAMA2P24043 3122 aaKnown RBP17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 C2orf16Q68DN1 1984 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 UBA6A0AVT1 1052 aaPredicted RBP17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CAPN8A6NHC0 703 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZNF197O14709 1029 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SRP72O76094 671 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SYN1P17600 705 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SERPINA4P29622 427 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CACNG1Q06432 222 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SULT2A1Q06520 285 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GALNT1Q10472 559 aaPredicted RBP17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PDAP1Q13442 181 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 METTL21CQ5VZV1 264 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 LYSMD3Q7Z3D4 306 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 OR6K2Q8NGY2 324 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 VOPP1Q96AW1 172 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SGF29Q96ES7 293 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 BIRC8Q96P09 236 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SPHK2Q9NRA0 654 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TAGLN3Q9UI15 199 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SLC25A13Q9UJS0 675 aa17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 OAS3Q9Y6K5 1087 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB1-201ENST00000374943 RHOBTB1O94844 696 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PABPC1P11940 636 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CTPS1P17812 591 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KCNA5P22460 613 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CTSOP43234 321 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PTPRRQ15256 657 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CDKN3Q16667 212 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SETMARQ53H47 684 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SEL1L3Q68CR1 1132 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ASTLQ6HA08 431 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ELMSAN1Q6PJG2 1045 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 STK40Q8N2I9 435 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PCDH20Q8N6Y1 951 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KIAA1958Q8N8K9 716 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GRIN3AQ8TCU5 1115 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PTERQ96BW5 349 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZNF707Q96C28 371 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 EID2BQ96D98 161 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ECHDC3Q96DC8 303 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 L3HYPDHQ96EM0 354 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 LYSMD1Q96S90 227 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 MIPEPQ99797 713 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 BBS2Q9BXC9 721 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 DERL2Q9GZP9 239 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TNKS2Q9H2K2 1166 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TFB2MQ9H5Q4 396 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ALG9Q9H6U8 611 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 BPIFA1Q9NP55 256 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 MTF2Q9Y483 593 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CCDC189A1A4V9 331 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 NEMP2A6NFY4 417 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 NEDD8-MDP1E9PL57 170 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZBTB14O43829 449 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 DIAPH2O60879 1101 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PYGLP06737 847 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ALPIP09923 528 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PKMP14618 531 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 FMO4P31512 558 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PTGER3P43115 390 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CCR10P46092 362 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 STK19P49842 368 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CDKN1CP49918 316 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 NTHL1P78549 312 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZRANB3Q5FWF4 1079 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 VWA5B1Q5TIE3 1220 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CERS6Q6ZMG9 384 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KIAA0907Q7Z7F0 614 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KIRREL3Q8IZU9 778 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CCNYL1Q8N7R7 359 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 MAPK15Q8TD08 544 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TRMOQ9BU70 441 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CPEB1Q9BZB8 566 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZFYVE1Q9HBF4 777 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZDHHC2Q9UIJ5 367 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 COLQQ9Y215 455 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PPIL1Q9Y3C6 166 aa17.93■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PIKFYVEQ9Y2I7 2098 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms