RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 AQP12AQ8IXF9 295 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 DDIASQ8IXT1 998 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 CENPSQ8N2Z9 138 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 C2CD4AQ8NCU7 369 aaPredicted RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ZNF420Q8TAQ5 688 aaPredicted RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ADAMTS16Q8TE57 1224 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ZUFSPQ96AP4 578 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 SLC45A3Q96JT2 553 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 COLEC11Q9BWP8 271 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 AKTIPQ9H8T0 292 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 HACD3Q9P035 362 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 MAP10Q9P2G4 905 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ANKRD12Q6UB98 2062 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 PSMD3O43242 534 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 DNAJB2P25686 324 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 DCKP27707 260 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ATP6V0D1P61421 351 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 YBX1P67809 324 aaKnown RBP11.08□□□□□ -0.64
CCDC40-203ENST00000374877 NOMO2Q5JPE7 1267 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
CCDC40-203ENST00000374877 NANOGP8Q6NSW7 305 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ALKAL1Q6UXT8 129 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 CYHR1Q6ZMK1 362 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 RYBPQ8N488 228 aaPredicted RBP11.08□□□□□ -0.64
CCDC40-203ENST00000374877 GSTO2Q9H4Y5 243 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 TRMT13Q9NUP7 481 aaKnown RBP11.08□□□□□ -0.64
CCDC40-203ENST00000374877 PKD2L2Q9NZM6 624 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ST3GAL5Q9UNP4 418 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 TMEM221A6NGB7 291 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 PIRO00625 290 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ARPC2O15144 300 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 RBP1P09455 135 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ZNF12P17014 697 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 CAPN3P20807 821 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 GPX3P22352 226 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ACADVLP49748 655 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 CCT8P50990 548 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 BMXP51813 675 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ATP6AP1Q15904 470 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ATPAF2Q8N5M1 289 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ANKRD49Q8WVL7 239 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 INIPQ9NRY2 104 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 SMPD3Q9NY59 655 aaPredicted RBP11.08□□□□□ -0.64
CCDC40-203ENST00000374877 RALGAPA2Q2PPJ7 1873 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 SMIM28A0A1B0GU29 152 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ANXA9O76027 345 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 CD4P01730 458 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 FUCA1P04066 466 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 KCNE1P15382 129 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 NCK1P16333 377 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 CAPGP40121 348 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 GNA12Q03113 381 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 SCAPQ12770 1279 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 NR1D2Q14995 579 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 TMTC4Q5T4D3 741 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 PAQR9Q6ZVX9 377 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ZC3H7AQ8IWR0 971 aaKnown RBP11.08□□□□□ -0.64
CCDC40-203ENST00000374877 ADGRG5Q8IZF4 528 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 RSPH1Q8WYR4 309 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 HOPXQ9BPY8 73 aaPredicted RBP11.08□□□□□ -0.64
CCDC40-203ENST00000374877 CMTM6Q9NX76 183 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 NDUFAF1Q9Y375 327 aa11.08□□□□□ -0.64
CCDC40-203ENST00000374877 RASAL1O95294 804 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 SNAP29O95721 258 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 CTSHP09668 335 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 HCAR3P49019 387 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 AIF1P55008 147 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 DAOAP59103 153 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 SOX4Q06945 474 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 FUT11Q495W5 492 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 PDCD4Q53EL6 469 aaKnown RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 DENND5AQ6IQ26 1287 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 ANKRD26P1Q6NSI1 321 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 FBXO46Q6PJ61 603 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 NCCRP1Q6ZVX7 275 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 GPRIN1Q7Z2K8 1008 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 LDB1Q86U70 411 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 SLC22A9Q8IVM8 553 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 DNAJB14Q8TBM8 379 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 MYRFLQ96LU7 910 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 DEFB118Q96PH6 123 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 GPATCH1Q9BRR8 931 aaKnown RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 CRISPLD2Q9H0B8 497 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 TRNAU1APQ9NX07 287 aaKnown RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 TRIP12Q14669 1992 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 C1orf232A0A0U1RR37 186 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 BBIP1A8MTZ0 92 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 B4GAT1O43505 415 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 CASP2P42575 452 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 RPS9P46781 194 aaKnown RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 BCAP31P51572 246 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 PHEXP78562 749 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 BNIP2Q12982 314 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 DSC3Q14574 896 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 OTUD3Q5T2D3 398 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 GPR158Q5T848 1215 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 WSCD1Q658N2 575 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 ZNF354CQ86Y25 554 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 MIER2Q8N344 545 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 TERB1Q8NA31 727 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms