RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 SEMA4BQ9NPR2 832 aaPredicted RBP23.76■■□□□ 1.39
CDK9-201ENST00000373264 TSR3Q9UJK0 312 aaKnown RBP23.76■■□□□ 1.39
CDK9-201ENST00000373264 COCHO43405 550 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 SNRPB2P08579 225 aaKnown RBP23.76■■□□□ 1.39
CDK9-201ENST00000373264 GFAPP14136 432 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 PRDX3P30048 256 aaKnown RBP23.76■■□□□ 1.39
CDK9-201ENST00000373264 TSNQ15631 228 aaKnown RBP23.76■■□□□ 1.39
CDK9-201ENST00000373264 LPCAT1Q8NF37 534 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 GPR150Q8NGU9 434 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 PCDH10Q9P2E7 1040 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 PRSS51A0A1B0GVH4 220 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 TRIM38O00635 465 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 MRASO14807 208 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 RHOBTB1O94844 696 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 LINC00032P0C843 101 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 ATP5C1P36542 298 aaKnown RBP23.75■■□□□ 1.39
CDK9-201ENST00000373264 AGTR2P50052 363 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 CDKL1Q00532 357 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 PSAPL1Q6NUJ1 521 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 GLT6D1Q7Z4J2 308 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 TTC16Q8NEE8 873 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 FBXO22Q8NEZ5 403 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 TSC22D3Q99576 134 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 RNF38Q9H0F5 515 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 UBA2Q9UBT2 640 aaPredicted RBP23.75■■□□□ 1.39
CDK9-201ENST00000373264 SRRDQ9UH36 339 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 DNMT3LQ9UJW3 386 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 TIMM22Q9Y584 194 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 SELPP16109 830 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 CHRM3P20309 590 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 OR1D2P34982 312 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 UGT2A3Q6UWM9 527 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 DDIASQ8IXT1 998 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 EFHBQ8N7U6 833 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 DCBLD1Q8N8Z6 715 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 SCLYQ96I15 445 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 GPR21Q99679 349 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 TTPALQ9BTX7 342 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 PDP2Q9P2J9 529 aa23.75■■□□□ 1.39
CDK9-201ENST00000373264 SUPT3HB4E1H0 165 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 SNAP91O60641 907 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 CLASP2O75122 1294 aaKnown RBP23.74■■□□□ 1.39
CDK9-201ENST00000373264 SUPT3HO75486 399 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 EEF1DP29692 281 aaKnown RBP23.74■■□□□ 1.39
CDK9-201ENST00000373264 OXCT1P55809 520 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 AFAP1L2Q8N4X5 818 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 TWIST2Q8WVJ9 160 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 LPGAT1Q92604 370 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 GBP5Q96PP8 586 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 PSKH2Q96QS6 385 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 LRFN2Q9ULH4 789 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 ASB1Q9Y576 335 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 ANKRD36A6QL64 1941 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 SCN5AQ14524 2016 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 NPEPPSL1A6NEC2 478 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 TRIM24O15164 1050 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 PEX1O43933 1283 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 SEC24AO95486 1093 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 EPOP01588 193 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 GPX3P22352 226 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 SUOXP51687 545 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 GALNT1Q10472 559 aaPredicted RBP23.74■■□□□ 1.39
CDK9-201ENST00000373264 STX5Q13190 355 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 CYTH1Q15438 398 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 KIF19Q2TAC6 998 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 C6orf52Q5T4I8 152 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 SCIMPQ6UWF3 145 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 BHMTQ93088 406 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 CCDC97Q96F63 343 aaPredicted RBP23.74■■□□□ 1.39
CDK9-201ENST00000373264 UNC93B1Q9H1C4 597 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 NLE1Q9NVX2 485 aaPredicted RBP23.74■■□□□ 1.39
CDK9-201ENST00000373264 SMPD4Q9NXE4 827 aa23.74■■□□□ 1.39
CDK9-201ENST00000373264 C2orf78A6NCI8 922 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 MOXD2PA6NHM9 499 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 NR5A2O00482 541 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 NRP2O60462 931 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 NIPSNAP2O75323 286 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 SRP72O76094 671 aaKnown RBP23.73■■□□□ 1.39
CDK9-201ENST00000373264 CRTAMO95727 393 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 CORO1AP31146 461 aaKnown RBP23.73■■□□□ 1.39
CDK9-201ENST00000373264 NFKB2Q00653 900 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 TRIM25Q14258 630 aaKnown RBP23.73■■□□□ 1.39
CDK9-201ENST00000373264 TYSND1Q2T9J0 566 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 VPS26BQ4G0F5 336 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 CLYBLQ8N0X4 340 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 TMEM102Q8N9M5 508 aaPredicted RBP23.73■■□□□ 1.39
CDK9-201ENST00000373264 SLC43A3Q8NBI5 491 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 VN1R3Q9BXE9 311 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 UTP6Q9NYH9 597 aaKnown RBP23.73■■□□□ 1.39
CDK9-201ENST00000373264 SEPT3Q9UH03 358 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 FKBPLQ9UIM3 349 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.73■■□□□ 1.39
CDK9-201ENST00000373264 ZNF840PA6NDX5 716 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 INSIG1O15503 277 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 ECI2O75521 394 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 SLC26A3P40879 764 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 SLC7A2P52569 658 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 ALG1LQ6GMV1 187 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 TICAM1Q8IUC6 712 aa23.73■■□□□ 1.39
CDK9-201ENST00000373264 SPDYE1Q8NFV5 336 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms