RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 BORAQ6PGQ7 559 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 BRAT1Q6PJG6 821 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 TMPRSS9Q7Z410 1059 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 GAS2L3Q86XJ1 694 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 CCDC170Q8IYT3 715 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 PAF1Q8N7H5 531 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 PSKH2Q96QS6 385 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 PANX2Q96RD6 677 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 LUC7LQ9NQ29 371 aaKnown RBP19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 TNFRSF10CO14798 259 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 MFSD11O43934 449 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 MAFKO60675 156 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 CPNE6O95741 557 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 NTRK1P04629 796 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 IL4RP24394 825 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 MMP12P39900 470 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 MAGEA1P43355 309 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 NSUN2Q08J23 767 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 SLC10A7Q0GE19 358 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 C16orf72Q14CZ0 275 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 ANKRD20A8PQ5CZ79 823 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 NCBP2-AS2Q69YL0 99 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 LRRC49Q8IUZ0 686 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 SFTPA2Q8IWL1 248 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 PLA2G15Q8NCC3 412 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 KIAA1524Q8TCG1 905 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 JPH3Q8WXH2 748 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 FUBP1Q96AE4 644 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 TMEM168Q9H0V1 697 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 RDH14Q9HBH5 336 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 FGF22Q9HCT0 170 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 ATP8A1Q9Y2Q0 1164 aa19.18■□□□□ 0.66
TRAPPC3-204ENST00000373166 LRRD1A4D1F6 860 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 CFAP69A5D8W1 941 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 ZW10O43264 779 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 HOXC4P09017 264 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 SLC1A1P43005 524 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 ATP1A2P50993 1020 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 SCNN1BP51168 640 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 B4GALNT1Q00973 533 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 BCL2L1Q07817 233 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 PAFAH1B3Q15102 231 aaKnown RBP19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 TCEAL1Q15170 157 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 ODF2Q5BJF6 829 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 CAMK1DQ8IU85 385 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 FAF2Q96CS3 445 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 SLC12A9Q9BXP2 914 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 MRPL40Q9NQ50 206 aaKnown RBP19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 ANKMY1Q9P2S6 941 aa19.17■□□□□ 0.66
TRAPPC3-204ENST00000373166 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 HGSO14964 777 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 B4GAT1O43505 415 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 SPOPO43791 374 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 BUB1BO60566 1050 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 RECQL5O94762 991 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 IPO7O95373 1038 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 LCA5LO95447 670 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 CCL4P13236 92 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 MMP13P45452 471 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 NOP2P46087 812 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 GALNT2Q10471 571 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 UBAP2LQ14157 1087 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 CLPPQ16740 277 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 AMZ1Q400G9 498 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 MARC1Q5VT66 337 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 TIGD7Q6NT04 549 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 PTRH1Q86Y79 214 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 NKD1Q969G9 470 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 TAAR9Q96RI9 348 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 CYP4F12Q9HCS2 524 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 MOSPD1Q9UJG1 213 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 FLNCQ14315 2725 aa19.16■□□□□ 0.66
TRAPPC3-204ENST00000373166 RHPN2P1A8MT19 583 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 PDE2AO00408 941 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 PEX11BO96011 259 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 KRT1P04264 644 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 KDELR1P24390 212 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 ALDH4A1P30038 563 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 GARSP41250 739 aaKnown RBP19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 OR1D5P58170 312 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 KCNAB2Q13303 367 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 LRRC38Q5VT99 294 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 TMTC1Q8IUR5 882 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 LURAP1LQ8IV03 231 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 RHOT1Q8IXI2 618 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 IL22RA1Q8N6P7 574 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 CCL4L1Q8NHW4 92 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 GPBAR1Q8TDU6 330 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 RAPGEF5Q92565 580 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 ZNF830Q96NB3 372 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 MGME1Q9BQP7 344 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 HAUS2Q9NVX0 235 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 TUBD1Q9UJT1 453 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 PCDHGA3Q9Y5H0 932 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 PCDHA13Q9Y5I0 950 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 ANKRD36A6QL64 1941 aa19.15■□□□□ 0.66
TRAPPC3-204ENST00000373166 ZNF487B1APH4 448 aa19.14■□□□□ 0.65
TRAPPC3-204ENST00000373166 PRKCGP05129 697 aa19.14■□□□□ 0.65
TRAPPC3-204ENST00000373166 ELFN1P0C7U0 828 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms