RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 PRKAA2P54646 552 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 GRB7Q14451 532 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 VPS26BQ4G0F5 336 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 SGO1Q5FBB7 561 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 OTOP2Q7RTS6 562 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 DNAJB7Q7Z6W7 309 aaPredicted RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 LRRC49Q8IUZ0 686 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 RDH11Q8TC12 318 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 PPWD1Q96BP3 646 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 MFSD1Q9H3U5 465 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 STN1Q9H668 368 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 MYOCOSA0A1B0GUC4 107 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 MROH6A6NGR9 719 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 E7ENX8 843 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 PIP5K1BO14986 540 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 H2AFYO75367 372 aaKnown RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 FGF1P05230 155 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 COL6A2P12110 1019 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 BTG3Q14201 252 aaPredicted RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 NRF1Q16656 503 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 DIS3LQ8TF46 1054 aaKnown RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 PTCD2Q8WV60 388 aaKnown RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 ATP6V1E2Q96A05 226 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 ECSITQ9BQ95 431 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 RTKNQ9BST9 563 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 EML4Q9HC35 981 aaKnown RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 CD274Q9NZQ7 290 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 EGFL7Q9UHF1 273 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 NYNRINQ9P2P1 1898 aaKnown RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 IGLV3-10A0A075B6K4 115 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 LOC285095A0A1B0GVY8 99 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 TRPC5OSA6NMA1 111 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 DRGXA6NNA5 263 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 ZBBXA8MT70 800 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 TMEM189-UBE2V1I3L0A0 370 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 SMAD6O43541 496 aaKnown RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 PEX1O43933 1283 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 MYL4P12829 197 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 ALOX15P16050 662 aaPredicted RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 TUFMP49411 452 aaKnown RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 YBEYP58557 167 aaPredicted RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 ACAP2Q15057 778 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 DBN1Q16643 649 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 MAP7D1Q3KQU3 841 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 RAB44Q7Z6P3 723 aaPredicted RBP11.72□□□□□ -0.53
PDE6C-201ENST00000371447 LRRC43Q8N309 656 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 EEF1AKMT1Q8WVE0 214 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 ZBTB26Q9HCK0 441 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 CLEC4EQ9ULY5 219 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 YIPF1Q9Y548 306 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 CPQQ9Y646 472 aa11.72□□□□□ -0.53
PDE6C-201ENST00000371447 WASH4PA8MWX3 477 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 CLASP2O75122 1294 aaKnown RBP11.71□□□□□ -0.53
PDE6C-201ENST00000371447 BAIAP3O94812 1187 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 CRTAMO95727 393 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 HLA-DPA1P20036 260 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 DEFB103AP81534 67 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 TRAF2Q12933 501 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 MSLNQ13421 630 aaPredicted RBP11.71□□□□□ -0.53
PDE6C-201ENST00000371447 BLMHQ13867 455 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 VEPH1Q14D04 833 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 FAM91A1Q658Y4 838 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 DNAJC14Q6Y2X3 702 aaPredicted RBP11.71□□□□□ -0.53
PDE6C-201ENST00000371447 KIAA0408Q6ZU52 694 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 FBXO39Q8N4B4 442 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 AFAP1L2Q8N4X5 818 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 PIP4K2CQ8TBX8 421 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 LRGUKQ96M69 825 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 C1orf21Q9H246 121 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 ARNT2Q9HBZ2 717 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 ZMYM5Q9UJ78 669 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 F8W8V4 182 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 HGFP14210 728 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 CD1DP15813 335 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 ZNF37AP17032 561 aaPredicted RBP11.71□□□□□ -0.53
PDE6C-201ENST00000371447 HTR7P34969 479 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 CSKP41240 450 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 STX1BP61266 288 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 ZXDBP98169 803 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 PFKPQ01813 784 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 ELAVL2Q12926 359 aaKnown RBP11.71□□□□□ -0.53
PDE6C-201ENST00000371447 CYTH1Q15438 398 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 ADGRF1Q5T601 910 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.53
PDE6C-201ENST00000371447 FAM45BPQ6NSW5 357 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 UGT3A1Q6NUS8 523 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 C16orf89Q6UX73 402 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 APCDD1Q8J025 514 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 CDYL2Q8N8U2 506 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 ICA1LQ8NDH6 482 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.53
PDE6C-201ENST00000371447 FAM45AQ8TCE6 357 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 VPS33AQ96AX1 596 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 IGSF21Q96ID5 467 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 CNDP1Q96KN2 507 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 GSTO2Q9H4Y5 243 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 AKTIPQ9H8T0 292 aa11.71□□□□□ -0.53
PDE6C-201ENST00000371447 TAS2R13Q9NYV9 303 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms