RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 PBXIP1Q96AQ6 731 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 ACOX2Q99424 681 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 CCDC134Q9H6E4 229 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 INTS10Q9NVR2 710 aaKnown RBP19.39■□□□□ 0.69
CHTOP-204ENST00000368694 GRID1Q9ULK0 1009 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 UPK3BL1B0FP48 263 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 UPK3BL2E5RIL1 263 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 NDUFS3O75489 264 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 PRAMEF1O95521 474 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 GALK1P51570 392 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 RAB10P61026 200 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 POU4F1Q01851 419 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 ARHGEF7Q14155 803 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 ZNF460Q14592 562 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 TAS2R42Q7RTR8 314 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 CCDC63Q8NA47 563 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 OMDQ99983 421 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 LIMD1Q9UGP4 676 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 SARDHQ9UL12 918 aa19.39■□□□□ 0.69
CHTOP-204ENST00000368694 WDR91A4D1P6 747 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 GMNCA6NCL1 334 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 GOLGA8CPA6NN73 597 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 C16orf96A6NNT2 1141 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 PFDN6O15212 129 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 GPR39O43194 453 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 CYP2A6P11509 494 aaPredicted RBP19.38■□□□□ 0.69
CHTOP-204ENST00000368694 BPIP17213 487 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 ETV4P43268 484 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 TTPAP49638 278 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 XIAPP98170 497 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 IRF9Q00978 393 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 AARS2Q5JTZ9 985 aaKnown RBP19.38■□□□□ 0.69
CHTOP-204ENST00000368694 CEP97Q8IW35 865 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 PIANPQ8IYJ0 282 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 CHPFQ8IZ52 775 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 ARMC2Q8NEN0 867 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 PIP4K2CQ8TBX8 421 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.38■□□□□ 0.698e-6■■□□□ 11.8
CHTOP-204ENST00000368694 MAGEB18Q96M61 343 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 KCNK12Q9HB15 430 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 PCDH12Q9NPG4 1184 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 DKK3Q9UBP4 350 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 APPL1Q9UKG1 709 aa19.38■□□□□ 0.69
CHTOP-204ENST00000368694 TSPAN11A1L157 253 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 SRP72O76094 671 aaKnown RBP19.37■□□□□ 0.69
CHTOP-204ENST00000368694 IL1BP01584 269 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 VIMP08670 466 aaKnown RBP19.37■□□□□ 0.69
CHTOP-204ENST00000368694 CHRM1P11229 460 aaPredicted RBP19.37■□□□□ 0.69
CHTOP-204ENST00000368694 SEC13P55735 322 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 TAS2R39P59534 338 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 CACNG1Q06432 222 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 N4BP2L1Q5TBK1 243 aaPredicted RBP19.37■□□□□ 0.69
CHTOP-204ENST00000368694 HECTD2Q5U5R9 776 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 Q7L0L9 218 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 PARS2Q7L3T8 475 aaKnown RBP19.37■□□□□ 0.69
CHTOP-204ENST00000368694 ZNF513Q8N8E2 541 aaPredicted RBP19.37■□□□□ 0.69
CHTOP-204ENST00000368694 BCAS4Q8TDM0 211 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 CHMP6Q96FZ7 201 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 TCF12Q99081 682 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 HCN2Q9UL51 889 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 SPECC1L-ADORA2AF8WAN1 911 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 SLC35E2BP0CK96 405 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 TIMP2P16035 220 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 VIPR1P32241 457 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 CTHP32929 405 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 SPAM1P38567 509 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 IRX4P78413 519 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 PTSQ03393 145 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 C16orf46Q6P387 395 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 SUGP1Q8IWZ8 645 aaKnown RBP19.37■□□□□ 0.69
CHTOP-204ENST00000368694 HCAR2Q8TDS4 363 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 TSNARE1Q96NA8 513 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 OLFM1Q99784 485 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 C19orf43Q9BQ61 176 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 CCDC68Q9H2F9 335 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 IL26Q9NPH9 171 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 SUN2Q9UH99 717 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 CORO1CQ9ULV4 474 aaPredicted RBP19.37■□□□□ 0.69
CHTOP-204ENST00000368694 VPS9D1Q9Y2B5 631 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 VWA7Q9Y334 891 aa19.37■□□□□ 0.69
CHTOP-204ENST00000368694 GLYATL1P3A0A0U1RQE8 302 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 TCP11X1B4DZS4 312 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 NEFHP12036 1026 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 CRABP2P29373 138 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 WASP42768 502 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 ILF2Q12905 390 aaKnown RBP19.36■□□□□ 0.69
CHTOP-204ENST00000368694 PDK4Q16654 411 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 INSCQ1MX18 579 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 RNF187Q5TA31 235 aaPredicted RBP19.36■□□□□ 0.69
CHTOP-204ENST00000368694 FAM45BPQ6NSW5 357 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 TXNDC11Q6PKC3 985 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 KYAT3Q6YP21 454 aaKnown RBP19.36■□□□□ 0.69
CHTOP-204ENST00000368694 DSG4Q86SJ6 1040 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 PLD6Q8N2A8 252 aaKnown RBP19.36■□□□□ 0.69
CHTOP-204ENST00000368694 PLCD3Q8N3E9 789 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 TMIEQ8NEW7 156 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 FAM45AQ8TCE6 357 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 SCG3Q8WXD2 468 aaKnown RBP19.36■□□□□ 0.69
CHTOP-204ENST00000368694 TSPAN17Q96FV3 270 aa19.36■□□□□ 0.69
CHTOP-204ENST00000368694 CDX2Q99626 313 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms