RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 PTSQ03393 145 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 GALNT2Q10471 571 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 SQSTM1Q13501 440 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 PEX6Q13608 980 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 IHHQ14623 411 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 AMZ1Q400G9 498 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 ALG1LQ6GMV1 187 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 SLC30A9Q6PML9 568 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 NDUFAF2Q8N183 169 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 EXD3Q8N9H8 876 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 PATE1Q8WXA2 126 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 MAML1Q92585 1016 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 FATE1Q969F0 183 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 SEMA3CQ99985 751 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 NUDT22Q9BRQ3 303 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 FUCA2Q9BTY2 467 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 SUDS3Q9H7L9 328 aaPredicted RBP15.96■□□□□ 0.15
CKS1B-202ENST00000368436 ANAPC7Q9UJX3 599 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 SETXQ7Z333 2677 aaKnown RBP15.96■□□□□ 0.15
CKS1B-202ENST00000368436 TENM4Q6N022 2769 aa15.96■□□□□ 0.15
CKS1B-202ENST00000368436 SDK2Q58EX2 2172 aa15.96■□□□□ 0.14
CKS1B-202ENST00000368436 PIEZO2Q9H5I5 2752 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 IGHV5-10-1A0A0J9YXX1 117 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 A0A0J9YYE9 177 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 A0A0U1RQS6 177 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 GOLGA6CA6NDK9 693 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 GOLGA6BA6NDN3 693 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 AGRPO00253 132 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 PPM1DO15297 605 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 SERPINC1P01008 464 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 TRBC1P01850 177 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 ITGB2P05107 769 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 CD48P09326 243 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 GOLGA6DP0CG33 693 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 CCL4P13236 92 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 KRT10P13645 584 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 PBX1P40424 430 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 GARSP41250 739 aaKnown RBP15.95■□□□□ 0.14
CKS1B-202ENST00000368436 LIMK2P53671 638 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 MMRN1Q13201 1228 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 TRA2AQ13595 282 aaKnown RBP eCLIP15.95■□□□□ 0.14
CKS1B-202ENST00000368436 KRT81Q14533 505 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 PAFAH1B3Q15102 231 aaKnown RBP15.95■□□□□ 0.14
CKS1B-202ENST00000368436 TDRD12Q587J7 1177 aaKnown RBP15.95■□□□□ 0.14
CKS1B-202ENST00000368436 MANEAQ5SRI9 462 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 LRRC66Q68CR7 880 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 ZNF765Q7L2R6 523 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 RAVER1Q8IY67 606 aaKnown RBP15.95■□□□□ 0.14
CKS1B-202ENST00000368436 AP2M1Q96CW1 435 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 SMIM14Q96QK8 99 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 NUP85Q9BW27 656 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 POLR1EQ9GZS1 481 aaKnown RBP15.95■□□□□ 0.14
CKS1B-202ENST00000368436 CDH19Q9H159 772 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 WDR70Q9NW82 654 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 GOLGA6AQ9NYA3 693 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 AKAP7Q9P0M2 348 aaPredicted RBP15.95■□□□□ 0.14
CKS1B-202ENST00000368436 CD84Q9UIB8 345 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 PLEKHM1Q9Y4G2 1056 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 PCDHB11Q9Y5F2 797 aa15.95■□□□□ 0.14
CKS1B-202ENST00000368436 A0A087X0T9 212 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 MFSD11O43934 449 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 SERPING1P05155 500 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 PYGLP06737 847 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 FAM228BP0C875 321 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 ZNF30P17039 623 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 CES1P23141 567 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 ITKQ08881 620 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 DPYSL3Q14195 570 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 PYCR3Q53H96 274 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 TMEM164Q5U3C3 297 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 NCBP2-AS2Q69YL0 99 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 TIGD7Q6NT04 549 aaPredicted RBP15.94■□□□□ 0.14
CKS1B-202ENST00000368436 DOK6Q6PKX4 331 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 NRSN1Q8IZ57 195 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 OR4D9Q8NGE8 314 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 SCAMP4Q969E2 229 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 COX14Q96I36 57 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 CCDC74BQ96LY2 380 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 TSGA13Q96PP4 275 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 OR2M4Q96R27 311 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 AMACRQ9UHK6 382 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 TMEM98Q9Y2Y6 226 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 PCDHGA4Q9Y5G9 962 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 PCDHGA3Q9Y5H0 932 aa15.94■□□□□ 0.14
CKS1B-202ENST00000368436 ASH1LQ9NR48 2969 aaKnown RBP15.93■□□□□ 0.14
CKS1B-202ENST00000368436 IGHV1OR21-1A0A087WYE8 117 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 MYO1FO00160 1098 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 MATN3O15232 486 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 PRLP01236 227 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 FGF3P11487 239 aaPredicted RBP15.93■□□□□ 0.14
CKS1B-202ENST00000368436 WT1P19544 449 aaPredicted RBP15.93■□□□□ 0.14
CKS1B-202ENST00000368436 CCNCP24863 283 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 ACTR1BP42025 376 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 ARSDP51689 593 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 STC1P52823 247 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 ACTR1AP61163 376 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 ZBED6P86452 979 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 BIRC2Q13490 618 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 HADHQ16836 314 aaKnown RBP15.93■□□□□ 0.14
CKS1B-202ENST00000368436 ATP13A4Q4VNC1 1196 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms