RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 GON4LQ3T8J9 2241 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3DA0A087WVF3 549 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3IA0A087WXS9 549 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3EA0A087X179 549 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3KA0A087X1G2 549 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3FA6NER0 549 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3LB9A6J9 549 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 J3KR12 359 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TRAFD1O14545 582 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 SHOX2O60902 331 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 SLC35G4P0C7Q5 338 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3HP0C7X1 549 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 PTPN2P17706 415 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 MLLT6P55198 1093 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 FGD3Q5JSP0 725 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 DEPDC1Q5TB30 811 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3GQ6DHY5 549 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3CQ6IPX1 549 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TMC5Q6UXY8 1006 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ZDHHC13Q8IUH4 622 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D3Q8IZP1 549 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 C2orf73Q8N5S3 287 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 OR13C4Q8NGS5 318 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 HEXDCQ8WVB3 486 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 PLD4Q96BZ4 506 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 CLPTM1LQ96KA5 538 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 FCRL5Q96RD9 977 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ATG10Q9H0Y0 220 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 LRMDAQ9H2I8 198 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 EIF2B3Q9NR50 452 aaKnown RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ADAMTS5Q9UNA0 930 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TBC1D30Q9Y2I9 924 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 H0Y858 1186 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 SLC1A2P43004 574 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 NRG1Q02297 640 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TRIM32Q13049 653 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 CERS6Q6ZMG9 384 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 AGMOQ6ZNB7 445 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 NET1Q7Z628 596 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 CPNE9Q8IYJ1 553 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ZNF781Q8N8C0 355 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 BRSK1Q8TDC3 778 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 C2orf15Q8WU43 125 aaKnown RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 C7orf26Q96N11 449 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ABCB8Q9NUT2 735 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ADPRHL2Q9NX46 363 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 KLHL28Q9NXS3 571 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 DNAJB4Q9UDY4 337 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TMCO1Q9UM00 188 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 POLR3HQ9Y535 204 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 HS3ST4Q9Y661 456 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ARL5AQ9Y689 179 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 IGKV6D-21A0A0A0MT36 114 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 ACVRL1P37023 503 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 RPS7P62081 194 aaKnown RBP12.27□□□□□ -0.44
PTPRK-203ENST00000368207 CYP20A1Q6UW02 462 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 MAMDC4Q6UXC1 1216 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 STX19Q8N4C7 294 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 DHRSXQ8N5I4 330 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 ASZ1Q8WWH4 475 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 AP2M1Q96CW1 435 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 CXorf40BQ96DE9 158 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 OSBPL2Q9H1P3 480 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 FAM83DQ9H4H8 585 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 STK39Q9UEW8 545 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 MYADML2A6NDP7 307 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 MEIS3P2A8K0S8 358 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 TRIM38O00635 465 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 SERPINI2O75830 405 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 APOA1P02647 267 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 HSMCR30P0CW71 290 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 PLA2G4EQ3MJ16 856 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 ZNF438Q7Z4V0 828 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 AMIGO2Q86SJ2 522 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 KRT78Q8N1N4 520 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 ZNF276Q8N554 614 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 WDTC1Q8N5D0 677 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 RBM15BQ8NDT2 890 aaKnown RBP12.27□□□□□ -0.44
PTPRK-203ENST00000368207 HIC2Q96JB3 615 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 TMEM209Q96SK2 561 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 RIBC2Q9H4K1 309 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 PCDHB1Q9Y5F3 818 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 MYH3P11055 1940 aa12.27□□□□□ -0.44
PTPRK-203ENST00000368207 IGKV6-21A0A0C4DH24 114 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 NEMP2A6NFY4 417 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 ISM1B1AKI9 464 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 PTGES3LE9PB15 166 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 PRKCGP05129 697 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 HSPA7P48741 367 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 AP1S1P61966 158 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 CACNG1Q06432 222 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 TSNQ15631 228 aaKnown RBP12.27□□□□□ -0.45
PTPRK-203ENST00000368207 PHKG1Q16816 387 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 ATAD3BQ5T9A4 648 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 GPR180Q86V85 440 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 PQLC3Q8N755 202 aa12.27□□□□□ -0.45
PTPRK-203ENST00000368207 MAGEE2Q8TD90 523 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-203ENST00000368207 TMEM40Q8WWA1 233 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms