RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ANGPT2O15123 496 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 ATP6AP2O75787 350 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 H6PDO95479 791 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 NDST3O95803 873 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 SERPINF2P08697 491 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 MTHFD2P13995 350 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 ATP6V1B1P15313 513 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 ZNF23P17027 643 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 PSMA3P25788 255 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 KPNA1P52294 538 aaPredicted RBP14.26□□□□□ -0.13
CD48-201ENST00000368045 TUBA4AP68366 448 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 LCP2Q13094 533 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 OR4D1Q15615 310 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 PABPC1LQ4VXU2 614 aaKnown RBP14.26□□□□□ -0.13
CD48-201ENST00000368045 INTS11Q5TA45 600 aaKnown RBP14.26□□□□□ -0.13
CD48-201ENST00000368045 LCN8Q6JVE9 175 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 OGFOD2Q6N063 350 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 HMBOX1Q6NT76 420 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 CYP2R1Q6VVX0 501 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 RETREG3Q86VR2 466 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 MFSD2AQ8NA29 543 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 BLOC1S5Q8TDH9 187 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 HIC2Q96JB3 615 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 MPP4Q96JB8 637 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 SLC45A3Q96JT2 553 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 SEMA6AQ9H2E6 1030 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 PFDN4Q9NQP4 134 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 TLR8Q9NR97 1041 aaKnown RBP14.26□□□□□ -0.13
CD48-201ENST00000368045 TMEM45AQ9NWC5 275 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 MARCH2Q9P0N8 246 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 MAP10Q9P2G4 905 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 TMCO1Q9UM00 188 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 MYRFQ9Y2G1 1151 aa14.26□□□□□ -0.13
CD48-201ENST00000368045 TYW5A2RUC4 315 aaKnown RBP14.25□□□□□ -0.13
CD48-201ENST00000368045 OR6C75A6NL08 312 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 SYCE1LA8MT33 242 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 UBXN8O00124 270 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 NR5A2O00482 541 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 HTRA2O43464 458 aaPredicted RBP14.25□□□□□ -0.13
CD48-201ENST00000368045 C7P10643 843 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 GFAPP14136 432 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 ETFBP38117 255 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 CDH13P55290 713 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 NRF1Q16656 503 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 PFKFB4Q16877 469 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 SDHAF4Q5VUM1 108 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 AFTPHQ6ULP2 937 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 LAYNQ6UX15 382 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 ZBTB49Q6ZSB9 765 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 ZFP28Q8NHY6 868 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 FBXO32Q969P5 355 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 PPWD1Q96BP3 646 aaKnown RBP14.25□□□□□ -0.13
CD48-201ENST00000368045 C1QTNF3Q9BXJ4 246 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 NLE1Q9NVX2 485 aaPredicted RBP14.25□□□□□ -0.13
CD48-201ENST00000368045 TAS2R13Q9NYV9 303 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 ACTR3BQ9P1U1 418 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 VPS9D1Q9Y2B5 631 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 ARL5AQ9Y689 179 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 DOCK3Q8IZD9 2030 aa14.25□□□□□ -0.13
CD48-201ENST00000368045 LCHNA4D1U4 455 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 ZNF839A8K0R7 811 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 H3BNH8 94 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 NME4O00746 187 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 TMCC1O94876 653 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 CSPG5O95196 566 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 ASLP04424 464 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 FCGR1AP12314 374 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 TSPAN8P19075 237 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 ATP6V1B2P21281 511 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 IL10P22301 178 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 OR1E1P30953 314 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 GRIA3P42263 894 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 ALDH3B2P48448 385 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 GPR15P49685 360 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 INHBEP58166 350 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 RAD51Q06609 339 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 CACNB2Q08289 660 aaPredicted RBP14.24□□□□□ -0.13
CD48-201ENST00000368045 GEN1Q17RS7 908 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 TRIM71Q2Q1W2 868 aaKnown RBP14.24□□□□□ -0.13
CD48-201ENST00000368045 C5orf22Q49AR2 442 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 C10orf120Q5SQS8 335 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 KRT80Q6KB66 452 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 TXNDC11Q6PKC3 985 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 CAMK1DQ8IU85 385 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 DDIASQ8IXT1 998 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 RYBPQ8N488 228 aaPredicted RBP14.24□□□□□ -0.13
CD48-201ENST00000368045 FBXO39Q8N4B4 442 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 EXT2Q93063 718 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 RMND5BQ96G75 393 aaPredicted RBP14.24□□□□□ -0.13
CD48-201ENST00000368045 TMEM79Q9BSE2 394 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 TRIM54Q9BYV2 358 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 NOL11Q9H8H0 719 aaKnown RBP14.24□□□□□ -0.13
CD48-201ENST00000368045 PDFQ9HBH1 243 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 SLC12A8A0AV02 714 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 DHRS12A0PJE2 317 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 TTC24A2A3L6 582 aaPredicted RBP14.24□□□□□ -0.13
CD48-201ENST00000368045 CCDC160A6NGH7 325 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 H3BMM5 538 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 STX16O14662 325 aa14.24□□□□□ -0.13
CD48-201ENST00000368045 SEPT4O43236 478 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms