RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 EPHB1P54762 984 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 TIAL1Q01085 375 aaKnown RBP eCLIP9.48□□□□□ -0.89
VTA1-201ENST00000367621 SEMG2Q02383 582 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 PTSQ03393 145 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 RAD51Q06609 339 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 DNAJC3Q13217 504 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 UGP2Q16851 508 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 C2orf27AQ580R0 203 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 ZNF805Q5CZA5 627 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 TMEM196Q5HYL7 178 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 ZNF470Q6ECI4 717 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 FSTL4Q6MZW2 842 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 BRAT1Q6PJG6 821 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 RFLNAQ6ZTI6 216 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 KIAA0408Q6ZU52 694 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 TPRG1Q6ZUI0 275 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 PTAR1Q7Z6K3 402 aaPredicted RBP9.48□□□□□ -0.89
VTA1-201ENST00000367621 LDB1Q86U70 411 aaPredicted RBP9.48□□□□□ -0.89
VTA1-201ENST00000367621 CILP2Q8IUL8 1156 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 SUGP1Q8IWZ8 645 aaKnown RBP9.48□□□□□ -0.89
VTA1-201ENST00000367621 PIANPQ8IYJ0 282 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 DCLK2Q8N568 766 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 DEFB123Q8N688 67 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 OR4L1Q8NH43 312 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 CSGALNACT1Q8TDX6 532 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 PPM1EQ8WY54 764 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 ARRDC3Q96B67 414 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 MTBPQ96DY7 904 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 C19orf43Q9BQ61 176 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 FAM167BQ9BTA0 163 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 OSBPL1AQ9BXW6 950 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 C12orf65Q9H3J6 166 aaKnown RBP9.48□□□□□ -0.89
VTA1-201ENST00000367621 RHOJQ9H4E5 214 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 CD248Q9HCU0 757 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 BPIFA1Q9NP55 256 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 HEBP1Q9NRV9 189 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 NSMCE4AQ9NXX6 385 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 CACNA2D2Q9NY47 1150 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 SENP1Q9P0U3 644 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 B4GALT6Q9UBX8 382 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 FKBPLQ9UIM3 349 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 FBXO5Q9UKT4 447 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 IKBKGQ9Y6K9 419 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 MUC22E2RYF6 1773 aaPredicted RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 A0A1W2PQ67 120 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 A8MX80 341 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 LOC730098B7Z3J9 87 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 GOLGA8RI6L899 631 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 STX7O15400 261 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 CD3EAPO15446 510 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 EGFP01133 1207 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 C1SP09871 688 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 CHN1P15882 459 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 BPIP17213 487 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 RPA3P35244 121 aaPredicted RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 SPRP35270 261 aaPredicted RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 CDKN1CP49918 316 aaPredicted RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 PGGT1BP53609 377 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 WDR4P57081 412 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 PDE1BQ01064 536 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 GUCY1A3Q02108 690 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 RALGDSQ12967 914 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 THOC5Q13769 683 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 TYSND1Q2T9J0 566 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 PREPLQ4J6C6 727 aaPredicted RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 PPM1JQ5JR12 505 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 LRRC73Q5JTD7 316 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 HABP4Q5JVS0 413 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 LGSNQ5TDP6 509 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 MRPL14Q6P1L8 145 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 ZNF549Q6P9A3 640 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 CNSTQ6PJW8 725 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 CDHR3Q6ZTQ4 885 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 PARS2Q7L3T8 475 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 TAOK1Q7L7X3 1001 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 RALGPS2Q86X27 583 aaPredicted RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 LMNTD2Q8IXW0 634 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 UCMAQ8WVF2 138 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 ATXN2LQ8WWM7 1075 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 DNASE1L2Q92874 299 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 VPS39Q96JC1 886 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 SRPK1Q96SB4 655 aaKnown RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 GPR22Q99680 433 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 GPR63Q9BZJ6 419 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 C8orf33Q9H7E9 229 aaPredicted RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 ZFYVE1Q9HBF4 777 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 PCDH12Q9NPG4 1184 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 IL26Q9NPH9 171 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 FBXO6Q9NRD1 293 aaPredicted RBP9.47□□□□□ -0.89
VTA1-201ENST00000367621 MKS1Q9NXB0 559 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 SLC8A2Q9UPR5 921 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 STON1Q9Y6Q2 735 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 PIAS3Q9Y6X2 628 aa9.47□□□□□ -0.89
VTA1-201ENST00000367621 TRBV5-4A0A0C4DH59 114 aa9.46□□□□□ -0.9
VTA1-201ENST00000367621 C1orf232A0A0U1RR37 186 aa9.46□□□□□ -0.9
VTA1-201ENST00000367621 FAM47DPA6NHR8 397 aa9.46□□□□□ -0.9
VTA1-201ENST00000367621 UPK3BL1B0FP48 263 aa9.46□□□□□ -0.9
VTA1-201ENST00000367621 UPK3BL2E5RIL1 263 aa9.46□□□□□ -0.9
VTA1-201ENST00000367621 TPP1O14773 563 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms