RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SCGB2A1O75556 95 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 C6P13671 934 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TOB2Q14106 344 aaPredicted RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 KIAA0319Q5VV43 1072 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 VSTM1Q6UX27 236 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ULK2Q8IYT8 1036 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 IPMKQ8NFU5 416 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 BPIFB1Q8TDL5 484 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TPD52L3Q96J77 140 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 DPYSL5Q9BPU6 564 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ISCUQ9H1K1 167 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 OSGEPQ9NPF4 335 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 TUBG2Q9NRH3 451 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 CFAP97Q9P2B7 532 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 ARHGAP28Q9P2N2 729 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 GLS2Q9UI32 602 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 POLR3HQ9Y535 204 aaPredicted RBP8.64□□□□□ -1.03
SYNE1-206ENST00000367253 PCDHGA10Q9Y5H3 936 aa8.64□□□□□ -1.03
SYNE1-206ENST00000367253 LOC102724200A0A096LPH7 203 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 CD2BP2O95400 341 aaKnown RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 LIMK1P53667 647 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 EIF3EP60228 445 aaKnown RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ZNF776Q68DI1 518 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 PGM2L1Q6PCE3 622 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 KBTBD6Q86V97 674 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ZNF677Q86XU0 584 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ANKRD13BQ86YJ7 626 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 SLC25A41Q8N5S1 370 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ALLCQ8N6M5 410 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 POC5Q8NA72 575 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 STARD8Q92502 1023 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ADAM33Q9BZ11 813 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 NUAK2Q9H093 628 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 LRMDAQ9H2I8 198 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 PDE7BQ9NP56 450 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 AGPAT4Q9NRZ5 378 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 DNAJC28Q9NX36 388 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 SNTG2Q9NY99 539 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 PCDH10Q9P2E7 1040 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 POLG2Q9UHN1 485 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 CA5BQ9Y2D0 317 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 TPRKBQ9Y3C4 175 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 LTBP3Q9NS15 1303 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 PHLPP1O60346 1717 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 C15orf38-AP3S2A0A0A6YYH1 394 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 EFCAB10A6NFE3 127 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 TTC34A8MYJ7 566 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 PDXKO00764 312 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 AP2A1O95782 977 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ELFN1P0C7U0 828 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ADSLP30566 484 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 CASP7P55210 303 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 SRP54P61011 504 aaKnown RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 MYBPC1Q00872 1141 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 BATFQ16520 125 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 KCNT1Q5JUK3 1230 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 PARGQ86W56 976 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 LRRC17Q8N6Y2 441 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 FATE1Q969F0 183 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 TMEM175Q9BSA9 504 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 TRIM36Q9NQ86 728 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 RSL24D1Q9UHA3 163 aaKnown RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 TAGLN3Q9UI15 199 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 A0A096LPK6 155 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 NEDD8-MDP1E9PL57 170 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 SLC28A1O00337 649 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 NPC1O15118 1278 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 OAZ2O95190 189 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 HNF1AP20823 631 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ACADVLP49748 655 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 MAPK12P53778 367 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 SEC13P55735 322 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 LY6KQ17RY6 165 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 MANEAQ5SRI9 462 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 TTC39BQ5VTQ0 682 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 CACHD1Q5VU97 1274 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ZDHHC17Q8IUH5 632 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 CEP76Q8TAP6 659 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 SENP8Q96LD8 212 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 SHCBP1LQ9BZQ2 653 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ILKAPQ9H0C8 392 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ZNF221Q9UK13 617 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 HPSEQ9Y251 543 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 UBE2QL1A1L167 161 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 RGSL1A5PLK6 1076 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ZNF185O15231 689 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 UBOX5O94941 541 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 AHSA1O95433 338 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 SFTPCP11686 197 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 TFE3P19532 575 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 ATP6V1B2P21281 511 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 MAGEA4P43358 317 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 GSCP56915 257 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-206ENST00000367253 KCNJ2P63252 427 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 LAMTOR4Q0VGL1 99 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 FNBP1LQ5T0N5 605 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 GALNT18Q6P9A2 607 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 MOXD1Q6UVY6 613 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 OTOP1Q7RTM1 612 aa8.63□□□□□ -1.03
SYNE1-206ENST00000367253 PAGE2Q7Z2X7 111 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms