RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 SRRM1Q8IYB3 904 aaKnown RBP7.56□□□□□ -1.2
H3F3A-201ENST00000366813 Q8NA96 180 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 NSUN7Q8NE18 718 aaKnown RBP7.56□□□□□ -1.2
H3F3A-201ENST00000366813 PARD3BQ8TEW8 1205 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 C18orf25Q96B23 403 aaPredicted RBP7.56□□□□□ -1.2
H3F3A-201ENST00000366813 CNDP2Q96KP4 475 aaKnown RBP7.56□□□□□ -1.2
H3F3A-201ENST00000366813 TBCBQ99426 244 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 SMOQ99835 787 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 GPR174Q9BXC1 333 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 NFKBIZQ9BYH8 718 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 SACM1LQ9NTJ5 587 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 CTTNBP2NLQ9P2B4 639 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 TRIP11Q15643 1979 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 NAV3Q8IVL0 2385 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 CRYBG3Q68DQ2 2970 aa7.56□□□□□ -1.2
H3F3A-201ENST00000366813 OTOGQ6ZRI0 2925 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 LRRIQ4A6NIV6 560 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 FOXN3O00409 490 aaPredicted RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 SH2B2O14492 632 aaPredicted RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 CDKL5O76039 1030 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 NFATC1O95644 943 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 CDK4P11802 303 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 HMGA1P17096 107 aaKnown RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 CD6P30203 668 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 CLK3P49761 638 aaKnown RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 CCT8P50990 548 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 CASP5P51878 434 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 FOXI1Q12951 378 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 PRPF4BQ13523 1007 aaKnown RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 KCNT1Q5JUK3 1230 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 C20orf194Q5TEA3 1177 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 ANKRD45Q5TZF3 282 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 FOXR2Q6PJQ5 311 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 KIAA1324Q6UXG2 1013 aaKnown RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 MICU3Q86XE3 530 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 TMEM132CQ8N3T6 1108 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 FAM46DQ8NEK8 389 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 LRRC15Q8TF66 581 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 ASB10Q8WXI3 467 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 MRPS31Q92665 395 aaKnown RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 VCPIP1Q96JH7 1222 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 TRIB1Q96RU8 372 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 ADPGKQ9BRR6 497 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 SPATA5L1Q9BVQ7 753 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 TRPC7Q9HCX4 862 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 PRMT7Q9NVM4 692 aaPredicted RBP7.55□□□□□ -1.2
H3F3A-201ENST00000366813 RGL1Q9NZL6 768 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 KCNE5Q9UJ90 142 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 CORO2BQ9UQ03 480 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 SNX13Q9Y5W8 968 aa7.55□□□□□ -1.2
H3F3A-201ENST00000366813 A0A087WWL8 130 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 OR6C75A6NL08 312 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 TDP2O95551 362 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 ESRRBO95718 433 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 EGR2P11161 476 aaPredicted RBP7.54□□□□□ -1.2
H3F3A-201ENST00000366813 HSPA4P34932 840 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 TNFRSF4P43489 277 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 PRIM2P49643 509 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 TOB1P50616 345 aaPredicted RBP7.54□□□□□ -1.2
H3F3A-201ENST00000366813 UCP3P55916 312 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 C21orf58P58505 322 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 OSTNP61366 133 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 DMP1Q13316 513 aaPredicted RBP7.54□□□□□ -1.2
H3F3A-201ENST00000366813 MPP3Q13368 585 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 RAB32Q13637 225 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 LONRF1Q17RB8 773 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 C3orf38Q5JPI3 329 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 FBXO42Q6P3S6 717 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 CASC1Q6TDU7 716 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 ALKAL1Q6UXT8 129 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 OTUD6AQ7L8S5 288 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 POC1BQ8TC44 478 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 IPO4Q8TEX9 1081 aaKnown RBP7.54□□□□□ -1.2
H3F3A-201ENST00000366813 ACOX2Q99424 681 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 UNKQ9C0B0 810 aaKnown RBP7.54□□□□□ -1.2
H3F3A-201ENST00000366813 ZNF518BQ9C0D4 1074 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 POLR3FQ9H1D9 316 aaPredicted RBP7.54□□□□□ -1.2
H3F3A-201ENST00000366813 SLC38A7Q9NVC3 462 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 WSB2Q9NYS7 404 aaPredicted RBP7.54□□□□□ -1.2
H3F3A-201ENST00000366813 XPR1Q9UBH6 696 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 HESX1Q9UBX0 185 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 MAGED2Q9UNF1 606 aaPredicted RBP7.54□□□□□ -1.2
H3F3A-201ENST00000366813 NFE2L3Q9Y4A8 694 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 RAD54BQ9Y620 910 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 COX11Q9Y6N1 276 aa7.54□□□□□ -1.2
H3F3A-201ENST00000366813 SPENQ96T58 3664 aaKnown RBP7.53□□□□□ -1.2
H3F3A-201ENST00000366813 TBC1D3BA6NDS4 549 aa7.53□□□□□ -1.2
H3F3A-201ENST00000366813 hCG_1984214I3L0E3 225 aa7.53□□□□□ -1.2
H3F3A-201ENST00000366813 KPNA5O15131 536 aa7.53□□□□□ -1.2
H3F3A-201ENST00000366813 DKC1O60832 514 aaKnown RBP eCLIP7.53□□□□□ -1.2
H3F3A-201ENST00000366813 VPS4BO75351 444 aa7.53□□□□□ -1.2
H3F3A-201ENST00000366813 SUN1O94901 812 aa7.53□□□□□ -1.2
H3F3A-201ENST00000366813 NTSR1P30989 418 aa7.53□□□□□ -1.2
H3F3A-201ENST00000366813 RPL9P32969 192 aaKnown RBP7.53□□□□□ -1.2
H3F3A-201ENST00000366813 TUFMP49411 452 aaKnown RBP7.53□□□□□ -1.2
H3F3A-201ENST00000366813 ERVPABLB-1P60509 514 aa7.53□□□□□ -1.2
H3F3A-201ENST00000366813 ZXDBP98169 803 aa7.53□□□□□ -1.2
H3F3A-201ENST00000366813 CTTNQ14247 550 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms