RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 IRF1P10914 325 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 PCNAP12004 261 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 TYMPP19971 482 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 COPZ1P61923 177 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 INCA1Q0VD86 236 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 CDCA2Q69YH5 1023 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 REP15Q6BDI9 236 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 SATL1Q86VE3 508 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 GJD3Q8N144 294 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 PHF10Q8WUB8 498 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 HAPLN3Q96S86 360 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 NOL6Q9H6R4 1146 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 EHD3Q9NZN3 535 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 COL20A1Q9P218 1284 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 VPS51Q9UID3 782 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 ZMYM5Q9UJ78 669 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 RGS10O43665 173 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 ZNF544Q6NX49 715 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 ERAP2Q6P179 960 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 EPGNQ6UW88 154 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 MCFD2Q8NI22 146 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 OXCT2Q9BYC2 517 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 FOXO6A8MYZ6 492 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 UBXN8O00124 270 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 CYS1Q717R9 158 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 TMEM110Q86TL2 294 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 FZD8Q9H461 694 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 OAS1P00973 400 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 RHOQP17081 205 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 FSTL1Q12841 308 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 TWIST2Q8WVJ9 160 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 NFKBIZQ9BYH8 718 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 HIPK3Q9H422 1215 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 CSH1P0DML2 217 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 CSH2P0DML3 217 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 GNPDA1P46926 289 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 IDH2P48735 452 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 MZT2AQ6P582 158 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 CDYL2Q8N8U2 506 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 STYXQ8WUJ0 223 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 AGO3Q9H9G7 860 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 TBCCD1Q9NVR7 557 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 HERVK_113P63132 956 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 EIF3MQ7L2H7 374 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 TMEM174Q8WUU8 243 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 ERVK-6Q9BXR3 956 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 LAMB2P55268 1798 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 CST3P01034 146 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 SERPIND1P05546 499 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 CD48P09326 243 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 TSPAN19P0C672 248 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 PPM1JQ5JR12 505 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 LPGAT1Q92604 370 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 MYO7AQ13402 2215 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 MSCO60682 206 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 NADKO95544 446 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 RALGPS1Q5JS13 557 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 TRMT10BQ6PF06 316 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 SLCO6A1Q86UG4 719 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 GPR180Q86V85 440 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 VPS4AQ9UN37 437 aa11.78□□□□□ -0.52
CDC42BPA-202ENST00000366764 MATN3O15232 486 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 B4GALT5O43286 388 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 PBX3P40426 434 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 DPY19L1Q2PZI1 675 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 PAGE2Q7Z2X7 111 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 GOLM1Q8NBJ4 401 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 FTHL17Q9BXU8 183 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 LRRC3Q9BY71 257 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 URODP06132 367 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 ZNF132P52740 706 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 SPIDRQ14159 915 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 MED8Q96G25 268 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 GBA2Q9HCG7 927 aaPredicted RBP11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 CHRAC1Q9NRG0 131 aa11.77□□□□□ -0.52
CDC42BPA-202ENST00000366764 ADAMDEC1O15204 470 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC22A1O15245 554 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 NPPAP01160 153 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 CCNFP41002 786 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 STAT5AP42229 794 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 LIPEQ05469 1076 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 MOV10Q9HCE1 1003 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 PPM1HQ9ULR3 514 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 LINC00032P0C843 101 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 MTHFRP42898 656 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 CYP2A13Q16696 494 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZIK1Q3SY52 487 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 KCTD21Q4G0X4 260 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 PDCD4Q53EL6 469 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 MBLAC2Q68D91 279 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 SYTL1Q8IYJ3 562 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 HJURPQ8NCD3 748 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 SNX27Q96L92 541 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 TBCDQ9BTW9 1192 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 GRM3Q14832 879 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC39A12Q504Y0 691 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 FAM91A1Q658Y4 838 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 LBX2Q6XYB7 198 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms