RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 LINC00303Q3SY05 128 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 TMEM259Q4ZIN3 620 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 TEX44Q53QW1 395 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 INO80DQ53TQ3 878 aaPredicted RBP8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ARSIQ5FYB1 569 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ANKRD20A2Q5SQ80 823 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 TPRG1LQ5T0D9 272 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ANKRD20A1Q5TYW2 823 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 MARC1Q5VT66 337 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ANKRD20A3Q5VUR7 823 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 FAM46CQ5VWP2 391 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 FOXR1Q6PIV2 292 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ZNF574Q6ZN55 896 aaPredicted RBP8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ATG14Q6ZNE5 492 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 GCNT7Q6ZNI0 430 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 DPY19L3Q6ZPD9 716 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 GSTA5Q7RTV2 222 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 DSG4Q86SJ6 1040 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CTAGE6Q86UF2 777 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 IQCHQ86VS3 1027 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 JAMLQ86YT9 394 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CTAGE4Q8IX94 777 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CEP112Q8N8E3 955 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 OR4C6Q8NH72 309 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 GRIN3AQ8TCU5 1115 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 EXTL1Q92935 676 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 SLCO2A1Q92959 643 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ATXN7L3BQ96GX2 97 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 BMFQ96LC9 184 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 SPATA13Q96N96 652 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 BRD8Q9H0E9 1235 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 GBA3Q9H227 469 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 PREBQ9HCU5 417 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 HOMER3Q9NSC5 361 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 SEPT3Q9UH03 358 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 PCYOX1Q9UHG3 505 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 DRG1Q9Y295 367 aaKnown RBP8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ATP8A1Q9Y2Q0 1164 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 WASF2Q9Y6W5 498 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 U3KQA8 63 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 RP1P56715 2156 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 POM121BA6NF01 834 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 C5orf60A6NFR6 353 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 C1QTNF3-AMACRE9PGA6 284 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 RIOK3O14730 519 aaKnown RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 CASC3O15234 703 aaKnown RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 SPINT1O43278 529 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 EFSO43281 561 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 LEFTY1O75610 366 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 PIGNO95427 931 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 MT-CYBP00156 380 aaPredicted RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 KRT14P02533 472 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 FAM87AP0C7U9 286 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 ITGB6P18564 788 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 RPL22P35268 128 aaKnown RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 RENBPP51606 427 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 CCNHP51946 323 aaPredicted RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 GEMIN4P57678 1058 aaKnown RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 SLC7A5Q01650 507 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 SRSF6Q13247 344 aaKnown RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 OLIG2Q13516 323 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 PTK6Q13882 451 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 ISXQ2M1V0 245 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 P3H1Q32P28 736 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 SETMARQ53H47 684 aaPredicted RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 ZNF542PQ5EBM4 170 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 ALG1LQ6GMV1 187 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 C8orf74Q6P047 294 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 ERN2Q76MJ5 926 aaKnown RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 ABI3BPQ7Z7G0 1075 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 HORMAD1Q86X24 394 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 MMGT1Q8N4V1 131 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 PCDH20Q8N6Y1 951 aaKnown RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 CCDC89Q8N998 374 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 TMIEQ8NEW7 156 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 ATL2Q8NHH9 583 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 SPATA22Q8NHS9 363 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 ARRDC2Q8TBH0 407 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 MAPK15Q8TD08 544 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 NSMCE1Q8WV22 266 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 KLHDC7BQ96G42 594 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 PRR11Q96HE9 360 aaPredicted RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 OXNAD1Q96HP4 312 aaPredicted RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 APOLD1Q96LR9 279 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 TEKT5Q96M29 485 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 SLC46A1Q96NT5 459 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 PSKH2Q96QS6 385 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 SEMA3CQ99985 751 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 LRRC1Q9BTT6 524 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 MLPHQ9BV36 600 aaPredicted RBP8.2□□□□□ -1.1
MRPL55-211ENST00000366738 CEP44Q9C0F1 390 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 GLOD4Q9HC38 313 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 PCDH9Q9HC56 1237 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 GPR27Q9NS67 375 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 STARD5Q9NSY2 213 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 UBP1Q9NZI7 540 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 RSPH14Q9UHP6 348 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 KLF15Q9UIH9 416 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 GGT7Q9UJ14 662 aa8.2□□□□□ -1.1
MRPL55-211ENST00000366738 PNMA8BQ9ULN7 279 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms