RNA–Protein interactions for RNA: ENST00000365233.1

RNU4-12P-201, Transcript of RNA, U4 small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4-12P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-12P-201ENST00000365233 SIRPB2Q5JXA9 342 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 GPATCH4Q5T3I0 446 aaKnown RBP3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZC2HC1BQ5TFG8 222 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 FRG2Q64ET8 278 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 SLC27A1Q6PCB7 646 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 SUGP1Q8IWZ8 645 aaKnown RBP3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 DHX40Q8IX18 779 aaKnown RBP3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 ADAD2Q8NCV1 583 aaKnown RBP3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 MAPK1IP1LQ8NDC0 245 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 HUS1BQ8NHY5 278 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 ST6GAL2Q96JF0 529 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 SLC41A2Q96JW4 573 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 MTERF1Q99551 399 aaKnown RBP3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 HINT3Q9NQE9 182 aaKnown RBP3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 C20orf141Q9NUB4 165 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 HSPB7Q9UBY9 170 aa3.19□□□□□ -1.9
RNU4-12P-201ENST00000365233 PRKNO60260 465 aaPredicted RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 URODP06132 367 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZNF23P17027 643 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 PPP2R5BQ15173 497 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 NAA35Q5VZE5 725 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 ATG16L1Q676U5 607 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 FBXO46Q6PJ61 603 aaPredicted RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 BRAT1Q6PJG6 821 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZNF704Q6ZNC4 412 aaPredicted RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 LRRC8DQ7L1W4 858 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 SLC46A3Q7Z3Q1 461 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 PCDH20Q8N6Y1 951 aaKnown RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 SPATA5Q8NB90 893 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 THAP6Q8TBB0 222 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 TBC1D20Q96BZ9 403 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 QRFPRQ96P65 431 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 MPHOSPH6Q99547 160 aaKnown RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 CMKLR1Q99788 373 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 POLR3CQ9BUI4 534 aaPredicted RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 INTS2Q9H0H0 1204 aaKnown RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 NDST4Q9H3R1 872 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 GPR108Q9NPR9 543 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZNF624Q9P2J8 865 aaPredicted RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 CNOT7Q9UIV1 285 aaKnown RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 FAF1Q9UNN5 650 aaPredicted RBP3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 ERVK-11Q9UQG0 969 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 PTPRCP08575 1304 aa3.18□□□□□ -1.9
RNU4-12P-201ENST00000365233 IGLV5-45A0A087WSX0 123 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 SYNGR3O43761 229 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 EXTL3O43909 919 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 TACC1O75410 805 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 FTCDO95954 541 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 RPL24P83731 157 aaKnown RBP3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 SFMBT2Q5VUG0 894 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 TTI2Q6NXR4 508 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 RRM2BQ7LG56 351 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 APLFQ8IW19 511 aaPredicted RBP3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 NKAPQ8N5F7 415 aaKnown RBP3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZNF248Q8NDW4 579 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 TRIM58Q8NG06 486 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 TMEM190Q8WZ59 177 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 CCT6BQ92526 530 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 TM9SF4Q92544 642 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 H2AFJQ9BTM1 129 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 ISCA1Q9BUE6 129 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 IFIH1Q9BYX4 1025 aaKnown RBP3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 SLC25A10Q9UBX3 287 aaPredicted RBP3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 POLG2Q9UHN1 485 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 UTYO14607 1347 aa3.17□□□□□ -1.9
RNU4-12P-201ENST00000365233 SMIM1B2RUZ4 78 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 FAM106CPP0CH98 169 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 NR1D1P20393 614 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 CDH15P55291 814 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 ISL1P61371 349 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 CSNK2A1P68400 391 aaPredicted RBP3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 UBE3AQ05086 875 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 FOXM1Q08050 763 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 NAE1Q13564 534 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 TMEM35AQ53FP2 167 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZNF497Q6ZNH5 498 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 NOTCH2NLQ7Z3S9 236 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 CSNK2A3Q8NEV1 391 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZCCHC10Q8TBK6 192 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 ANKRD9Q96BM1 317 aaPredicted RBP3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZNF354BQ96LW1 612 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 TFB2MQ9H5Q4 396 aaKnown RBP3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 ITM2CQ9NQX7 267 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 C2orf42Q9NWW7 574 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 OGFRQ9NZT2 677 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 A4GNTQ9UNA3 340 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 KCNK7Q9Y2U2 307 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 SMAD5-AS1Q9Y6J3 95 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 PRSS21Q9Y6M0 314 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 SCINQ9Y6U3 715 aa3.16□□□□□ -1.9
RNU4-12P-201ENST00000365233 ZCWPW2A0A1B0GU75 182 aa3.15□□□□□ -1.91
RNU4-12P-201ENST00000365233 SPINT2O43291 252 aa3.15□□□□□ -1.91
RNU4-12P-201ENST00000365233 SEC14L5O43304 696 aa3.15□□□□□ -1.91
RNU4-12P-201ENST00000365233 COX7A2P14406 83 aa3.15□□□□□ -1.91
RNU4-12P-201ENST00000365233 POLR2CP19387 275 aaPredicted RBP3.15□□□□□ -1.91
RNU4-12P-201ENST00000365233 PGM1P36871 562 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms