RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 RAB40AQ8WXH6 277 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 LRRC59Q96AG4 307 aaKnown RBP1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 ZC3HAV1LQ96H79 300 aaKnown RBP1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 SCLT1Q96NL6 688 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 DUX3Q96PT4 197 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 EPYCQ99645 322 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 REEP2Q9BRK0 252 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 SLC32A1Q9H598 525 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 EPHX3Q9H6B9 360 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 PPCSQ9HAB8 311 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 PTPRHQ9HD43 1115 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 RIC8AQ9NPQ8 531 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 OR6C3Q9NZP0 311 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 NDRG3Q9UGV2 375 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 CNOT7Q9UIV1 285 aaKnown RBP1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 COL4A4P53420 1690 aaPredicted RBP1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 REV3LO60673 3130 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 ERICH3Q5RHP9 1530 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 PLEKHG2Q9H7P9 1386 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 C5orf42Q9H799 3197 aa1.69□□□□□ -2.14
RNU4-41P-201ENST00000364426 ATXN2Q99700 1313 aaKnown RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SAMD9Q5K651 1589 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CHD2O14647 1828 aaKnown RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CENPFP49454 3210 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 GOLGA6L10A0A0M3HER8 536 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 FAM90A7PA6NKC0 464 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 FAM90A22PA8MWA6 464 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 FAM90A12PA8MX19 464 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 FAM90A23PA8MXZ1 464 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 IFRD1O00458 451 aaPredicted RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 TIMM23O14925 209 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CLGNO14967 610 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 TIPRLO75663 272 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 NDUFB4O95168 129 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 PMS2P2O95744 297 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SERPINB2P05120 415 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 IFIT1P09914 478 aaKnown RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 HSD3B1P14060 373 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CD58P19256 250 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 GPTP24298 496 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 POU1F1P28069 291 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 PSMC2P35998 433 aaKnown RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CCT5P48643 541 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CXCR3P49682 368 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 NR1H2P55055 460 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 UBE3AQ05086 875 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 FCN2Q15485 313 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 TAF11Q15544 211 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 NFIL3Q16649 462 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 KRTAP21-3Q3LHN1 58 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 ACCSLQ4AC99 568 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 MAP3K21Q5TCX8 1036 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 NAA35Q5VZE5 725 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 ATG16L1Q676U5 607 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CPLX2Q6PUV4 134 aaKnown RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 LDHAL6AQ6ZMR3 332 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 BBS12Q6ZW61 710 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 MOB3CQ70IA8 216 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 MARK2Q7KZI7 788 aaKnown RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 LRRC8DQ7L1W4 858 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SHFQ7M4L6 423 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 TADA2BQ86TJ2 420 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 ZC3HC1Q86WB0 502 aaKnown RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SUGP1Q8IWZ8 645 aaKnown RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 ANKRD42Q8N9B4 389 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 WDSUB1Q8N9V3 476 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 C11orf65Q8NCR3 313 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 GJC3Q8NFK1 279 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 LNX1Q8TBB1 728 aaPredicted RBP1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SECTM1Q8WVN6 248 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CD101Q93033 1021 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 FEM1CQ96JP0 617 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 ZNF570Q96NI8 536 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 TWNKQ96RR1 684 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SIN3AQ96ST3 1273 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 LMAN2LQ9H0V9 348 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SMYD2Q9NRG4 433 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CYSLTR2Q9NS75 346 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SMARCAL1Q9NZC9 954 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 PEMTQ9UBM1 199 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 HDAC6Q9UBN7 1215 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 MALT1Q9UDY8 824 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 GAB2Q9UQC2 676 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 CARD8Q9Y2G2 431 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 SNX9Q9Y5X1 595 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 PTPN23Q9H3S7 1636 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 ZFYVE26Q68DK2 2539 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 ARHGEF5Q12774 1597 aa1.68□□□□□ -2.14
RNU4-41P-201ENST00000364426 ADGRF5Q8IZF2 1346 aa1.67□□□□□ -2.14
RNU4-41P-201ENST00000364426 SCN11AQ9UI33 1791 aa1.67□□□□□ -2.14
RNU4-41P-201ENST00000364426 EEA1Q15075 1411 aa1.67□□□□□ -2.14
RNU4-41P-201ENST00000364426 TAF1P21675 1872 aa1.67□□□□□ -2.14
RNU4-41P-201ENST00000364426 PLXNA3P51805 1871 aa1.67□□□□□ -2.14
RNU4-41P-201ENST00000364426 TOP2AP11388 1531 aaKnown RBP1.67□□□□□ -2.14
RNU4-41P-201ENST00000364426 MYO9AB2RTY4 2548 aa1.67□□□□□ -2.14
RNU4-41P-201ENST00000364426 UBR1Q8IWV7 1749 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms