RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 PALB2Q86YC2 1186 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 ARID3BQ8IVW6 561 aaPredicted RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 MMP21Q8N119 569 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 POGLUT1Q8NBL1 392 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 OR8K5Q8NH50 307 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 DUSP19Q8WTR2 217 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 TRIB2Q92519 343 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 LPAR1Q92633 364 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 MOAP1Q96BY2 351 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 EGLN2Q96KS0 407 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZMAT2Q96NC0 199 aaKnown RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 PAFAH2Q99487 392 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 RABEP2Q9H5N1 569 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 DENND2DQ9H6A0 471 aaPredicted RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 CATSPERBQ9H7T0 1116 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 CCDC177Q9NQR7 707 aaPredicted RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 TMEM51Q9NW97 253 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 OR6C3Q9NZP0 311 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 CPSF2Q9P2I0 782 aaKnown RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 IL36RNQ9UBH0 155 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZHX1Q9UKY1 873 aaPredicted RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 PLAGL1Q9UM63 463 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 BTBD3Q9Y2F9 522 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 HS3ST3B1Q9Y662 390 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 hCG_1809904A0A1W2PP81 198 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 A0A1W2PPE2 198 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 A0A1W2PR64 198 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 LNP1A1A4G5 178 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 A8MXE2 369 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 I6L893 689 aaPredicted RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 SMAD9O15198 467 aaKnown RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TBX10O75333 385 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 AVILO75366 819 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 APOA4P06727 396 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TPOP07202 933 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 PRF1P14222 555 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 MMP9P14780 707 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TNFRSF1BP20333 461 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 PIGAP37287 484 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ME1P48163 572 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 LIG4P49917 911 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 MMP14P50281 582 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 PPP5CP53041 499 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 UBXN2AP68543 259 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ROR1Q01973 937 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 MYBPC2Q14324 1141 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 RBMS2Q15434 407 aaKnown RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 PNLIPRP3Q17RR3 467 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZNF805Q5CZA5 627 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TCP11X2Q5H9J9 407 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 PPP6R3Q5H9R7 873 aaPredicted RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 DAB2IPQ5VWQ8 1189 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TMEM198Q66K66 360 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZNF626Q68DY1 528 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 SHC4Q6S5L8 630 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 Q6ZSV7 163 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 AACSQ86V21 672 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 SCYL3Q8IZE3 742 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 AADATQ8N5Z0 425 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TDRD5Q8NAT2 981 aaKnown RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 APPL2Q8NEU8 664 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 PTPMT1Q8WUK0 201 aaPredicted RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 NSMCE1Q8WV22 266 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZNF622Q969S3 477 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZG16BQ96DA0 208 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 PGAP3Q96FM1 320 aaPredicted RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 URB1-AS1Q96HZ7 61 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 APOLD1Q96LR9 279 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 CEP295NLQ96MC4 621 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 GAD1Q99259 594 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TMEM79Q9BSE2 394 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 PPP1R3EQ9H7J1 279 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 EPB41L5Q9HCM4 733 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 MMP25Q9NPA2 562 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 KRCC1Q9NPI7 259 aaPredicted RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 SH3GLB2Q9NR46 395 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ACSS1Q9NUB1 689 aaPredicted RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TRNAU1APQ9NX07 287 aaKnown RBP3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 TAB2Q9NYJ8 693 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ANAPC2Q9UJX6 822 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 RCOR1Q9UKL0 485 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ACSL5Q9ULC5 683 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 CCL27Q9Y4X3 112 aa3.78□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZNF804BA4D1E1 1349 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 IGLV5-39A0A0G2JS06 123 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 TCRBV21S2A2A0A5A6 115 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 KANSL1LA0AUZ9 987 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 KDM4EB2RXH2 506 aaPredicted RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 J3KR12 359 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 MAP2K7O14733 419 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 HSPA12AO43301 675 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 VNN2O95498 520 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 ICAM1P05362 532 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 CD38P28907 300 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 EEF1DP29692 281 aaKnown RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 HNRNPH1P31943 449 aaKnown RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 CAPZA2P47755 286 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 RAD23AP54725 363 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 ECT2LQ008S8 904 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 SPOCK1Q08629 439 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms