RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 TAOK1Q7L7X3 1001 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 SDCCAG8Q86SQ7 713 aaPredicted RBP4.97□□□□□ -1.61
RPL39-201ENST00000361575 PIP4P1Q86T03 277 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 GGNQ86UU5 652 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 FOXRED2Q8IWF2 684 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 MCEMP1Q8IX19 187 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 GUF1Q8N442 669 aaKnown RBP4.97□□□□□ -1.61
RPL39-201ENST00000361575 SCCPDHQ8NBX0 429 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 AGBL3Q8NEM8 1001 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 TMEM174Q8WUU8 243 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 RMDN1Q96DB5 314 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 VCPIP1Q96JH7 1222 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 FER1L6-AS2Q96M78 137 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 CDRT15Q96T59 188 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 HAUS8Q9BT25 410 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 GPR88Q9GZN0 384 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 DENND2DQ9H6A0 471 aaPredicted RBP4.97□□□□□ -1.61
RPL39-201ENST00000361575 PPP1R3EQ9H7J1 279 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 MMP25Q9NPA2 562 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 PSD3Q9NYI0 1048 aa4.97□□□□□ -1.61
RPL39-201ENST00000361575 SOS1Q07889 1333 aaPredicted RBP4.97□□□□□ -1.61
RPL39-201ENST00000361575 LOC100509620A0A075B734 347 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 TCRBV21S2A2A0A5A6 115 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 AKR1B15C9JRZ8 316 aaPredicted RBP4.96□□□□□ -1.62
RPL39-201ENST00000361575 TADA2AO75478 443 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 RBMXL2O75526 392 aaKnown RBP4.96□□□□□ -1.62
RPL39-201ENST00000361575 SLCO2B1O94956 709 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 NDUFB4O95168 129 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 HIST1H2ABP04908 130 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 TPOP07202 933 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 G6PDP11413 515 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 HIST1H2ADP20671 130 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 CERS1P27544 350 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 MC5RP33032 325 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 METAP2P50579 478 aaKnown RBP eCLIP4.96□□□□□ -1.621e-6■■□□□ 12.8
RPL39-201ENST00000361575 CCR3P51677 355 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 ELLP55199 621 aaPredicted RBP4.96□□□□□ -1.62
RPL39-201ENST00000361575 P2RX3P56373 397 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 SREBF2Q12772 1141 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 TFCP2Q12800 502 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 CAMK2DQ13557 499 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 MYBPC2Q14324 1141 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 EFNB3Q15768 340 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 PNLIPRP3Q17RR3 467 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 ZNF805Q5CZA5 627 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 DAB2IPQ5VWQ8 1189 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 SLC18B1Q6NT16 456 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 SLC2A7Q6PXP3 512 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 SUSD1Q6UWL2 747 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 SLC16A12Q6ZSM3 486 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 HIST3H2AQ7L7L0 130 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 PTF1AQ7RTS3 328 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 PATL1Q86TB9 770 aaKnown RBP4.96□□□□□ -1.62
RPL39-201ENST00000361575 TTC30BQ8N4P2 665 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 XXYLT1Q8NBI6 393 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 NEXN-AS1Q8NBZ9 246 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 SLC35F5Q8WV83 523 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 RSPH9Q9H1X1 276 aaPredicted RBP4.96□□□□□ -1.62
RPL39-201ENST00000361575 SEBOXQ9HB31 216 aaPredicted RBP4.96□□□□□ -1.62
RPL39-201ENST00000361575 EPB41L5Q9HCM4 733 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 ACSS1Q9NUB1 689 aaPredicted RBP4.96□□□□□ -1.62
RPL39-201ENST00000361575 FLRT1Q9NZU1 646 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 DNAJB4Q9UDY4 337 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 ZNF148Q9UQR1 794 aa4.96□□□□□ -1.62
RPL39-201ENST00000361575 A6NL46 340 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 TIMM23O14925 209 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 SMAD9O15198 467 aaKnown RBP4.95□□□□□ -1.62
RPL39-201ENST00000361575 ZC3H11AO75152 810 aaKnown RBP eCLIP4.95□□□□□ -1.62
RPL39-201ENST00000361575 CREG1O75629 220 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 DDNO94850 711 aaPredicted RBP4.95□□□□□ -1.62
RPL39-201ENST00000361575 BCL10O95999 233 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 SCG2P13521 617 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 MUTP22033 750 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 HOXC9P31274 260 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 PRCPP42785 496 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 MSH2P43246 934 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 RFX5P48382 616 aaPredicted RBP4.95□□□□□ -1.62
RPL39-201ENST00000361575 MYLK3Q32MK0 819 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 Q4G0T1 1027 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 Q5PR19 223 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 TEX38Q6PEX7 206 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 TRAT1Q6PIZ9 186 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 B3GNT6Q6ZMB0 384 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 Q6ZSV7 163 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 YTHDF3Q7Z739 585 aaKnown RBP4.95□□□□□ -1.62
RPL39-201ENST00000361575 GLRX5Q86SX6 157 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 CAMK1DQ8IU85 385 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 ARID3BQ8IVW6 561 aaPredicted RBP4.95□□□□□ -1.62
RPL39-201ENST00000361575 TC2NQ8N9U0 490 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 NSMCE1Q8WV22 266 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 DDB2Q92466 427 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 LPGAT1Q92604 370 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 PTERQ96BW5 349 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 RHBDF1Q96CC6 855 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 GRAMD2BQ96HH9 432 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 APOLD1Q96LR9 279 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 HARBI1Q96MB7 349 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 NAA11Q9BSU3 229 aaPredicted RBP4.95□□□□□ -1.62
RPL39-201ENST00000361575 DESI2Q9BSY9 194 aa4.95□□□□□ -1.62
RPL39-201ENST00000361575 PRSS22Q9GZN4 317 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms