RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 CHUKO15111 745 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 PRAMEF11O60813 436 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 NDUFA10O95299 355 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ADCY8P40145 1251 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 MAZP56270 477 aaKnown RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 AP1S1P61966 158 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ILF3Q12906 894 aaKnown RBP eCLIP5.93□□□□□ -1.469e-7■■■■■ 35.7
CDC42SE2-201ENST00000360515 SLC9B2Q86UD5 537 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 VPS36Q86VN1 386 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 RTL3Q8N8U3 475 aaKnown RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ZNF606Q8WXB4 792 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 NT5C1BQ96P26 610 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 NUDT9Q9BW91 350 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 NLNQ9BYT8 704 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 MIS12Q9H081 205 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 CASS4Q9NQ75 786 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 PHPT1Q9NRX4 125 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 PADI1Q9ULC6 663 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 VANGL2Q9ULK5 521 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ITM2BQ9Y287 266 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 BUB1BO60566 1050 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 TMCC1O94876 653 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 HEXIM1O94992 359 aaKnown RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 EPB41P11171 864 aaKnown RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 HCAR3P49019 387 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 DCDC1P59894 354 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 POLR2LP62875 67 aaKnown RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 IL10RAQ13651 578 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 NAA30Q147X3 362 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 PLA2G4EQ3MJ16 856 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 TAF8Q7Z7C8 310 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ZBTB2Q8N680 514 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 FAM46DQ8NEK8 389 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 DNAJB8Q8NHS0 232 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ZNF396Q96N95 335 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 OR2M4Q96R27 311 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 TNKS2Q9H2K2 1166 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 FAM204AQ9H8W3 233 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 POT1Q9NUX5 634 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 DDIT4Q9NX09 232 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 STAP1Q9ULZ2 295 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 DOLKQ9UPQ8 538 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 KLHL33A6NCF5 533 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 POLR1CO15160 346 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 FGF10O15520 208 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ZNF30P17039 623 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 NR1D1P20393 614 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 VIPR1P32241 457 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 MYBPC3Q14896 1274 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 PLEKHN1Q494U1 663 aaPredicted RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ACCSLQ4AC99 568 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 MCTP1Q6DN14 999 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 FAM198BQ6UWH4 519 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 RD3Q7Z3Z2 195 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 PSTKQ8IV42 348 aaKnown RBP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 OR7D4Q8NG98 312 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 LMF1Q96S06 567 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ACTL8Q9H568 366 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 ATP13A1Q9HD20 1204 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 AMACRQ9UHK6 382 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 SMC3Q9UQE7 1217 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 MAPK8IP1Q9UQF2 711 aa5.93□□□□□ -1.46
CDC42SE2-201ENST00000360515 TCRBV5S1A1TA0A578 114 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 TTLL8A6PVC2 850 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 OR1E1P30953 314 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 CAPZBP47756 277 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 RPL26P61254 145 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 FKBP3Q00688 224 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 CTBSQ01459 385 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 NYAP1Q6ZVC0 841 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 FAM183BPQ6ZVS7 135 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 TGIF2LYQ8IUE0 185 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 TRIM59Q8IWR1 403 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 ARSGQ96EG1 525 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 PCMTD1Q96MG8 357 aaPredicted RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 CPXM1Q96SM3 734 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 TIMM29Q9BSF4 260 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 TKTL2Q9H0I9 626 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 SLC26A1Q9H2B4 701 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 WDCPQ9H6R7 721 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 KCND1Q9NSA2 647 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 CNOT6Q9ULM6 557 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 SUFUQ9UMX1 484 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 RPL26L1Q9UNX3 145 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 CEP83Q9Y592 693 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 MRPS18BQ9Y676 258 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 CDC14CA4D256 554 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 RECQL5O94762 991 aaPredicted RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 CCNYL3P0C7X3 344 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 BRD2P25440 801 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 LZTR1Q8N653 840 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 Q8N9G6 341 aaPredicted RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 SLC37A2Q8TED4 501 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 ZDHHC6Q9H6R6 413 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 SIRPGQ9P1W8 387 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 ABI3Q9P2A4 366 aa5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 FARSAQ9Y285 508 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-201ENST00000360515 NTNG1Q9Y2I2 539 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms