RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ABCC13Q9NSE7 274 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SLC37A4O43826 429 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 FABP3P05413 133 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SLC10A7Q0GE19 358 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 FAM153CQ494X1 144 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 FNDC3BQ53EP0 1204 aaKnown RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 ING5Q8WYH8 240 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 BPNT1O95861 308 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 TPH1P17752 444 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 ASMTP46597 345 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 RPP38P78345 283 aaKnown RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 LINGO2Q7L985 606 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 ASB8Q9H765 288 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 ABCB9Q9NP78 766 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 FKBP7Q9Y680 259 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 PRKD3O94806 890 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 DNASE1L1P49184 302 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CHST4Q8NCG5 386 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 PRRG4Q9BZD6 226 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SLC9A3P48764 834 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SLC41A1Q8IVJ1 513 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 ELP3Q9H9T3 547 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SLC6A3Q01959 620 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SCUBE3Q8IX30 993 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CPB2Q96IY4 423 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 A0A075B6Q4 140 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 TRAFD1O14545 582 aaPredicted RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 IGKV5-2P06315 115 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CSF1RP07333 972 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 TBC1D25Q3MII6 688 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SVOPLQ8N434 492 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 THAP6Q8TBB0 222 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 IPCEF1Q8WWN9 437 aaPredicted RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 ART5Q96L15 291 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 TIPRLO75663 272 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 TRIM74Q86UV6 250 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 TRIM73Q86UV7 250 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 OR2T34Q8NGX1 318 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 OR2T3Q8NH03 318 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CELF6Q96J87 481 aaKnown RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 RIOK2Q9BVS4 552 aaKnown RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF69Q9UC07 566 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 PDE2AO00408 941 aaPredicted RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 PIK3CBP42338 1070 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 HHIPL2Q6UWX4 724 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CLIP3Q96DZ5 547 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 PDP1Q9P0J1 537 aaPredicted RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 MYO18AQ92614 2054 aaKnown RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 B8ZZF3 427 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 TFEBP19484 476 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 C15orf59Q2T9L4 293 aaPredicted RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CPTPQ5TA50 214 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 EDEM1Q92611 657 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SYT15Q9BQS2 421 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 GPATCH2LQ9NWQ4 482 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 MYO3AQ8NEV4 1616 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CYP17A1P05093 508 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 PPM1AP35813 382 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 GNALP38405 381 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 MPPE1Q53F39 396 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 DSELQ8IZU8 1212 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CIB1Q99828 191 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CEP41Q9BYV8 373 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 REXO2Q9Y3B8 237 aaKnown RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SLC22A1O15245 554 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 EIF4BP23588 611 aaKnown RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 RD3Q7Z3Z2 195 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 MPP5Q8N3R9 675 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 FAM84BQ96KN1 310 aaPredicted RBP9.28□□□□□ -0.92
VPS13A-203ENST00000360280 CDH19Q9H159 772 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 RHBGQ9H310 441 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 SLC27A6Q9Y2P4 619 aa9.28□□□□□ -0.92
VPS13A-203ENST00000360280 GNAO1P09471 354 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 SRSF11Q05519 484 aaKnown RBP9.27□□□□□ -0.92
VPS13A-203ENST00000360280 CDKAL1Q5VV42 579 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 DOK6Q6PKX4 331 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 ADGRG6Q86SQ4 1221 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 RCN3Q96D15 328 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 MTRRQ9UBK8 725 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 POLR3HQ9Y535 204 aaPredicted RBP9.27□□□□□ -0.92
VPS13A-203ENST00000360280 ZMPSTE24O75844 475 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 TXNL4AP83876 142 aaKnown RBP9.27□□□□□ -0.92
VPS13A-203ENST00000360280 GALNT5Q7Z7M9 940 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 SETD6Q8TBK2 473 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 HEXDCQ8WVB3 486 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 PPCDCQ96CD2 204 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 LGR4Q9BXB1 951 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 CLTCQ00610 1675 aaKnown RBP9.27□□□□□ -0.92
VPS13A-203ENST00000360280 ARL5CA6NH57 179 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 M0QX08 132 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 TSPAN1O60635 241 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 YES1P07947 543 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 LINGO3P0C6S8 592 aa9.27□□□□□ -0.92
VPS13A-203ENST00000360280 LSM14AQ8ND56 463 aaKnown RBP9.27□□□□□ -0.92
VPS13A-203ENST00000360280 ATP6V0D1P61421 351 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CSTF1Q05048 431 aaKnown RBP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 OR2L8Q8NGY9 312 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 OR4C6Q8NH72 309 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CPNE2Q96FN4 548 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 LACRTQ9GZZ8 138 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms