RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ACOX2Q99424 681 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 SEPT5Q99719 369 aaPredicted RBP20.41■□□□□ 0.86
COL13A1-202ENST00000357811 ARNT2Q9HBZ2 717 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 TMEM181Q9P2C4 612 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.41■□□□□ 0.86
COL13A1-202ENST00000357811 ANGPT2O15123 496 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 C8BP07358 591 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 EEF1DP29692 281 aaKnown RBP20.41■□□□□ 0.86
COL13A1-202ENST00000357811 OXTRP30559 389 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 SCNN1BP51168 640 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 MRPL10Q7Z7H8 261 aaKnown RBP20.41■□□□□ 0.86
COL13A1-202ENST00000357811 CHERPQ8IWX8 916 aaKnown RBP20.41■□□□□ 0.86
COL13A1-202ENST00000357811 CLYBLQ8N0X4 340 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 CBR4Q8N4T8 237 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 SOX17Q9H6I2 414 aaPredicted RBP20.41■□□□□ 0.86
COL13A1-202ENST00000357811 SARS2Q9NP81 518 aaKnown RBP20.41■□□□□ 0.86
COL13A1-202ENST00000357811 CHCHD3Q9NX63 227 aaKnown RBP20.41■□□□□ 0.86
COL13A1-202ENST00000357811 HCSTQ9UBK5 93 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 AZIN1O14977 448 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 CLASP2O75122 1294 aaKnown RBP20.4■□□□□ 0.86
COL13A1-202ENST00000357811 ASGR1P07306 291 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 MTHFD2P13995 350 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 RHOQP17081 205 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 KCNQ1P51787 676 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 TSNQ15631 228 aaKnown RBP20.4■□□□□ 0.86
COL13A1-202ENST00000357811 B3GNT6Q6ZMB0 384 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 KLHL23Q8NBE8 558 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 OR7D4Q8NG98 312 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 FBXO32Q969P5 355 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 PBXIP1Q96AQ6 731 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 RMDN1Q96DB5 314 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 CCSER2Q9H7U1 834 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 ZNF696Q9H7X3 374 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 ATP13A1Q9HD20 1204 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 MARCH2Q9P0N8 246 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 SLAMF8Q9P0V8 285 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 CDC7O00311 574 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 DUSP11O75319 330 aaKnown RBP20.4■□□□□ 0.86
COL13A1-202ENST00000357811 RHOBTB1O94844 696 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 STAMBPO95630 424 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 ZNF37AP17032 561 aaPredicted RBP20.4■□□□□ 0.86
COL13A1-202ENST00000357811 PRKCQQ04759 706 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 TAF10Q12962 218 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 UPF3AQ9H1J1 476 aaKnown RBP20.4■□□□□ 0.86
COL13A1-202ENST00000357811 BPIFA1Q9NP55 256 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 PRDM5Q9NQX1 630 aaPredicted RBP20.4■□□□□ 0.86
COL13A1-202ENST00000357811 HNRNPRO43390 633 aaKnown RBP20.4■□□□□ 0.86
COL13A1-202ENST00000357811 SLC5A2P31639 672 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 ZNF157P51786 506 aaPredicted RBP20.4■□□□□ 0.86
COL13A1-202ENST00000357811 MGAT3Q09327 533 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 GIPC2Q8TF65 315 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 SLC39A13Q96H72 371 aa20.4■□□□□ 0.86
COL13A1-202ENST00000357811 HTRA2O43464 458 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-202ENST00000357811 SLC7A1P30825 629 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 CCDC117Q8IWD4 279 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-202ENST00000357811 TMEM74Q96NL1 305 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 CDK15Q96Q40 435 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 POLG2Q9UHN1 485 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 RNF112Q9ULX5 631 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 TCRBV3S1A0A5B6 114 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 CAPN15O75808 1086 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 DNAJB1P25685 340 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 RGRP47804 291 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 FAM45BPQ6NSW5 357 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 MSANTD2Q6P1R3 559 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 SLC15A3Q8IY34 581 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 ZNF683Q8IZ20 524 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 GABPB2Q8TAK5 448 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-202ENST00000357811 FAM45AQ8TCE6 357 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 SLC2A11Q9BYW1 496 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 RBM38Q9H0Z9 239 aaKnown RBP20.39■□□□□ 0.85
COL13A1-202ENST00000357811 SPO11Q9Y5K1 396 aa20.39■□□□□ 0.85
COL13A1-202ENST00000357811 RNF103-CHMP3A0A140T963 221 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 INPP4BO15327 924 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 NDST2P52849 883 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 UGT3A1Q6NUS8 523 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 ZNF786Q8N393 782 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 OR2T34Q8NGX1 318 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 OR2T3Q8NH03 318 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 OR4L1Q8NH43 312 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 ZNF597Q96LX8 424 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 NSMCE3Q96MG7 304 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 SLC30A3Q99726 388 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 CATSPERZQ9NTU4 200 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 TMEM248Q9NWD8 314 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 ZNF623O75123 536 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 ASLP04424 464 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 RPL26P61254 145 aaKnown RBP20.38■□□□□ 0.85
COL13A1-202ENST00000357811 GPR162Q16538 588 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 OFCC1Q8IZS5 231 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 MIER2Q8N344 545 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 PCYOX1LQ8NBM8 494 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 OR4K2Q8NGD2 314 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 ZFRQ96KR1 1074 aaKnown RBP20.38■□□□□ 0.85
COL13A1-202ENST00000357811 ZBED2Q9BTP6 218 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 CRISPLD1Q9H336 500 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 CMTM6Q9NX76 183 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 NDUFAF1Q9Y375 327 aa20.38■□□□□ 0.85
COL13A1-202ENST00000357811 NPEPPSL1A6NEC2 478 aa20.37■□□□□ 0.85
COL13A1-202ENST00000357811 NT5C1B-RDH14C9J2C7 533 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms