RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PEX6Q13608 980 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 FAM151BQ6UXP7 276 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 HDAC10Q969S8 669 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 NUS1Q96E22 293 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 CDKN2AIPNLQ96HQ2 116 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 LRFN3Q9BTN0 628 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 SLC17A9Q9BYT1 436 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 CDC42EP4Q9H3Q1 356 aaKnown RBP25.31■■□□□ 1.64
SSBP3-202ENST00000357475 SEMA4AQ9H3S1 761 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 PKD2L2Q9NZM6 624 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 SLCO1B1Q9Y6L6 691 aa25.31■■□□□ 1.64
SSBP3-202ENST00000357475 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 CCDC162PA2VCL2 907 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 SLC31A1O15431 190 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 USP1O94782 785 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 XIAPP98170 497 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 PDE1BQ01064 536 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 KYNUQ16719 465 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 WSCD2Q2TBF2 565 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 STEAP4Q687X5 459 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 TRMT10BQ6PF06 316 aaKnown RBP25.3■■□□□ 1.64
SSBP3-202ENST00000357475 SLC41A1Q8IVJ1 513 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 TMEFF1Q8IYR6 380 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 PLA2G15Q8NCC3 412 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 KLF6Q99612 283 aaPredicted RBP25.3■■□□□ 1.64
SSBP3-202ENST00000357475 RIOK2Q9BVS4 552 aaKnown RBP25.3■■□□□ 1.64
SSBP3-202ENST00000357475 LRRC4CQ9HCJ2 640 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 MBNL1Q9NR56 388 aaKnown RBP25.3■■□□□ 1.64
SSBP3-202ENST00000357475 CA5BQ9Y2D0 317 aa25.3■■□□□ 1.64
SSBP3-202ENST00000357475 GOLGA8KD6RF30 607 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 GOLGA8TH3BQL2 631 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 LATO43561 262 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 GALR2O43603 387 aaPredicted RBP25.29■■□□□ 1.64
SSBP3-202ENST00000357475 RPP40O75818 363 aaKnown RBP25.29■■□□□ 1.64
SSBP3-202ENST00000357475 SKIDA1Q1XH10 827 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 NLRP9Q7RTR0 991 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 CYP2U1Q7Z449 544 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 RELL1Q8IUW5 271 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 ORAI3Q9BRQ5 295 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 RIMKLBQ9ULI2 386 aa25.29■■□□□ 1.64
SSBP3-202ENST00000357475 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.29■■□□□ 1.64
SSBP3-202ENST00000357475 MAP3K13O43283 966 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 VAPBO95292 243 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 POLBP06746 335 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 F7P08709 466 aaPredicted RBP25.28■■□□□ 1.64
SSBP3-202ENST00000357475 SPAM1P38567 509 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 ARCN1P48444 511 aaKnown RBP25.28■■□□□ 1.64
SSBP3-202ENST00000357475 CDKN1CP49918 316 aaPredicted RBP25.28■■□□□ 1.64
SSBP3-202ENST00000357475 LAMB3Q13751 1172 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 CHRNA6Q15825 494 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 HENMT1Q5T8I9 393 aaKnown RBP25.28■■□□□ 1.64
SSBP3-202ENST00000357475 TP53I13Q8NBR0 393 aaPredicted RBP25.28■■□□□ 1.64
SSBP3-202ENST00000357475 GAB3Q8WWW8 586 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 AP2M1Q96CW1 435 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 C1QTNF1Q9BXJ1 281 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 FAM83DQ9H4H8 585 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 FAM96AQ9H5X1 160 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 FAM169AQ9Y6X4 670 aa25.28■■□□□ 1.64
SSBP3-202ENST00000357475 FADS2P1A8MWK0 482 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 PIAS1O75925 651 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 SOD1P00441 154 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 GOT2P00505 430 aaKnown RBP25.27■■□□□ 1.64
SSBP3-202ENST00000357475 MCM3P25205 808 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 MC4RP32245 332 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 CCR5P51681 352 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 SGCGQ13326 291 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 IRF4Q15306 451 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 ZNF528Q3MIS6 628 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 PALM2Q8IXS6 379 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.27■■□□□ 1.64
SSBP3-202ENST00000357475 SNX19Q92543 992 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 CENPTQ96BT3 561 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 NAT9Q9BTE0 207 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 TNRC6BQ9UPQ9 1833 aaKnown RBP25.27■■□□□ 1.64
SSBP3-202ENST00000357475 GLYATL1P3A0A0U1RQE8 302 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 METTL12A8MUP2 240 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 UGT1A9O60656 530 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 PCCBP05166 539 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 UGT1A6P19224 532 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 UGT1A1P22309 533 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 UGT1A4P22310 534 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 MAOBP27338 520 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 UGT1A3P35503 534 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 UGT1A5P35504 534 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 IGFALSP35858 605 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 PMS2P54278 862 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 DCDC1P59894 354 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 SLMAPQ14BN4 828 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 AGERQ15109 404 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 SPANXN3Q5MJ09 141 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 KIAA0930Q6ICG6 404 aaPredicted RBP25.27■■□□□ 1.64
SSBP3-202ENST00000357475 SLC36A4Q6YBV0 504 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 ARMCX6Q7L4S7 300 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 NRSN1Q8IZ57 195 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.27■■□□□ 1.641e-9■■■■■ 83.4
SSBP3-202ENST00000357475 PEX13Q92968 403 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 HSPA12BQ96MM6 686 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 PLEKHG4BQ96PX9 1271 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 TSPYL1Q9H0U9 437 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 EPB41L4BQ9H329 900 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms