RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PDCD5O14737 125 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 SLC22A1O15245 554 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 TIPRLO75663 272 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 SLC25A12O75746 678 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 NDST1P52848 882 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 OR52E6Q96RD3 313 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 XKR8Q9H6D3 395 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 NOTOA8MTQ0 251 aa12.83□□□□□ -0.35
SMC4-202ENST00000357388 PRR5-ARHGAP8B1AHC4 643 aa12.83□□□□□ -0.35
SMC4-202ENST00000357388 ERP29P30040 261 aaKnown RBP12.83□□□□□ -0.35
SMC4-202ENST00000357388 CCR3P51677 355 aa12.83□□□□□ -0.35
SMC4-202ENST00000357388 ARHGAP8P85298 464 aa12.83□□□□□ -0.35
SMC4-202ENST00000357388 APTXQ7Z2E3 356 aaKnown RBP12.83□□□□□ -0.35
SMC4-202ENST00000357388 FBXL16Q8N461 479 aa12.83□□□□□ -0.35
SMC4-202ENST00000357388 RFKQ969G6 155 aa12.83□□□□□ -0.35
SMC4-202ENST00000357388 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 RLN2P04090 185 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 CDH5P33151 784 aaPredicted RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 MARSP56192 900 aaKnown RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 C15orf59Q2T9L4 293 aaPredicted RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 SYCE2Q6PIF2 218 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 KIAA1324Q6UXG2 1013 aaKnown RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 QSOX2Q6ZRP7 698 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 ATCAYQ86WG3 371 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 FAM98AQ8NCA5 519 aaKnown RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 ASAH2Q9NR71 780 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 DNAJC11Q9NVH1 559 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 DGKBQ9Y6T7 804 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 KDM6BO15054 1643 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 KANTRA0A1W2PQU2 76 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 SLC22A2O15244 555 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 SCELO95171 688 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 FABP3P05413 133 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 CRHR1P34998 444 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 PSEN1P49768 467 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 TAS2R41P59536 307 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 PPATQ06203 517 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 PLEKHG4Q58EX7 1191 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 NBPF12Q5TAG4 269 aaPredicted RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 ADNP2Q6IQ32 1131 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 LAPTM4BQ86VI4 370 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 CCDC107Q8WV48 283 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 ANKRA2Q9H9E1 313 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 CLEC4AQ9UMR7 237 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 PDLIM1O00151 329 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 CCNCP24863 283 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 USF2Q15853 346 aaPredicted RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 SLC39A12Q504Y0 691 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 ZNF567Q8N184 647 aa12.83□□□□□ -0.36
SMC4-202ENST00000357388 CPSF7Q8N684 471 aaKnown RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 TIMM13Q9Y5L4 95 aaPredicted RBP12.83□□□□□ -0.36
SMC4-202ENST00000357388 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 MID1O15344 667 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 DHX15O43143 795 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 GLRA2P23416 452 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 S100A12P80511 92 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 POU5F1Q01860 360 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 CXCL9Q07325 125 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 DLG1Q12959 904 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ZNF234Q14588 700 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 PGM5Q15124 567 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 USP50Q70EL3 339 aaPredicted RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 RIOX2Q8IUF8 465 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 CYP4X1Q8N118 509 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 DNAJA4Q8WW22 397 aaPredicted RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 DUSP9Q99956 384 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 FTHL17Q9BXU8 183 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 TBCCD1Q9NVR7 557 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 PDE10AQ9Y233 779 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ADORA2AP29274 412 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 SLC6A4P31645 630 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ARF3P61204 181 aaPredicted RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 ARF1P84077 181 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 CNPY1Q3B7I2 92 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 CEP68Q76N32 757 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ZNF615Q8N8J6 731 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ANKRD52Q8NB46 1076 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 SLC4A11Q8NBS3 891 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ROPN1LQ96C74 230 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 MTFMTQ96DP5 389 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 SLC4A9Q96Q91 983 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ZNF670Q9BS34 389 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 INTS7Q9NVH2 962 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 MRPS23Q9Y3D9 190 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 ALG5Q9Y673 324 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 A0A0J9YYE9 177 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 FADS2P1A8MWK0 482 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 PCBP1Q15365 356 aaKnown RBP eCLIP12.82□□□□□ -0.363e-12■■■■□ 20.8
SMC4-202ENST00000357388 GLYATQ6IB77 296 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 KLHL35Q6PF15 583 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 FATE1Q969F0 183 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 CNPPD1Q9BV87 410 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 RC3H2Q9HBD1 1191 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 ABCB9Q9NP78 766 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 INTS10Q9NVR2 710 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 PDP1Q9P0J1 537 aaPredicted RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 MARCH2Q9P0N8 246 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms