RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SIX1Q15475 284 aaPredicted RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SMAD1Q15797 465 aaKnown RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 NFE2Q16621 373 aaPredicted RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 STAG3L4Q8TBR4 150 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ULK4Q96C45 1275 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TBL1YQ9BQ87 522 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 MAN1C1Q9NR34 630 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 E5RI56 91 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 G3V2T6 193 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 AIREO43918 545 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 REM1O75628 298 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 RHOBTB1O94844 696 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 APOL3O95236 402 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PCSK1P29120 753 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 RORAP35398 523 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 IFNGR2P38484 337 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 S100A12P80511 92 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 GALNT3Q14435 633 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 C2CD6Q53TS8 623 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 FGD3Q5JSP0 725 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 METTL2BQ6P1Q9 378 aaKnown RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 CUZD1Q86UP6 607 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 DNAJA4Q8WW22 397 aaPredicted RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SLC30A2Q9BRI3 323 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TRAF4Q9BUZ4 470 aaPredicted RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SMURF2Q9HAU4 748 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 POPDC3Q9HBV1 291 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SPO11Q9Y5K1 396 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ROBO1Q9Y6N7 1651 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PRKCBP05771 671 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 L1CAMP32004 1257 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 GPX6P59796 221 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 MINDY1Q8N5J2 469 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 APPL2Q8NEU8 664 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ABHD11Q8NFV4 315 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 OR8J3Q8NGG0 315 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TMIGD2Q96BF3 282 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 RNF157Q96PX1 679 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ACP6Q9NPH0 428 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 XPNPEP1Q9NQW7 623 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TNFRSF10DQ9UBN6 386 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 FAM86B1E9PN63 330 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TK2O00142 265 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 AP2A1O95782 977 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SERPINA1P01009 418 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ITGB3P05106 788 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 FAM86B2P0C5J1 330 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 FOSL1P15407 271 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SSTR3P32745 418 aaPredicted RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 HOXD13P35453 343 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PIK3CBP42338 1070 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 LSM3P62310 102 aaKnown RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 DAG1Q14118 895 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 KRT33BQ14525 404 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SMUG1Q53HV7 270 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 FAM35AQ86V20 835 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PHTF2Q8N3S3 785 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 FAM109AQ8N4B1 249 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF224Q9NZL3 707 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 AJAP1Q9UKB5 411 aaPredicted RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 AZIN1O14977 448 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TBX1O43435 398 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 NDUFB10O96000 172 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CD48P09326 243 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 HTR2BP41595 481 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 NR4A2P43354 598 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 YAP1P46937 504 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CEBPAP49715 358 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ETV1P50549 477 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 NFIAQ12857 509 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 STXBP2Q15833 593 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 FER1L6Q2WGJ9 1857 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TBC1D10BQ4KMP7 808 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 REP15Q6BDI9 236 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PLEKHM3Q6ZWE6 761 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SCML4Q8N228 414 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 OR5K1Q8NHB7 308 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 EXT2Q93063 718 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CDCA5Q96FF9 252 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 NXF3Q9H4D5 531 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CAB39LQ9H9S4 337 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 C3orf14Q9HBI5 128 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PCDHGB4Q9UN71 923 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 AXIN2Q9Y2T1 843 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 DERAQ9Y315 318 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SNED1Q8TER0 1413 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 FAM234BA2RU67 622 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TUBAL3A6NHL2 446 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TCF4P15884 667 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CCNCP24863 283 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 GNPDA1P46926 289 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PPP3CAQ08209 521 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 E2F2Q14209 437 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ANKRD26P1Q6NSI1 321 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CHADLQ6NUI6 762 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 DCP1BQ8IZD4 617 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SPAG16Q8N0X2 631 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 FIG4Q92562 907 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SLC47A1Q96FL8 570 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms