RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 RNF148Q8N7C7 305 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 YIPF3Q9GZM5 350 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 SPAG4Q9NPE6 437 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 TBKBP1A7MCY6 615 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 CDK14O94921 469 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 UPP2O95045 317 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 ZCCHC18P0CG32 403 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 MTHFD2P13995 350 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 RAD51Q06609 339 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 PFKFB4Q16877 469 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 CYHR1Q6ZMK1 362 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 CRIPAKQ8N1N5 446 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 LPGAT1Q92604 370 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 TUBGCP5Q96RT8 1024 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 CWH43Q9H720 699 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 MTRRQ9UBK8 725 aa22.2■■□□□ 1.14
NKX2-1-201ENST00000354822 UBA6A0AVT1 1052 aaPredicted RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 UBXN8O00124 270 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 FBP2O00757 339 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 AZIN1O14977 448 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 PYGLP06737 847 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 GFAPP14136 432 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 MSX2P35548 267 aaPredicted RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 CDH13P55290 713 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 RPS24P62847 133 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 PCDH20Q8N6Y1 951 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 OR4K2Q8NGD2 314 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 EXT2Q93063 718 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 GBP5Q96PP8 586 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 TDRD1Q9BXT4 1180 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 ADGRE3Q9BY15 652 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 MID1IP1Q9NPA3 183 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 RIMS3Q9UJD0 308 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 AGO1Q9UL18 857 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 SPO11Q9Y5K1 396 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 DNAJC15Q9Y5T4 150 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 BACE2Q9Y5Z0 518 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 PRSS51A0A1B0GVH4 220 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 A0A1B0GVM2 712 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 SYCE1LA8MT33 242 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 BBIP1A8MTZ0 92 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 DENRO43583 198 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 SRP72O76094 671 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 GJB5O95377 273 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 CAPNS1P04632 268 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 TSPAN8P19075 237 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 LPOP22079 712 aaPredicted RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 FOLH1Q04609 750 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 USP41Q3LFD5 358 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 SPATA24Q86W54 205 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 ST13P4Q8IZP2 240 aaPredicted RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 NKAPQ8N5F7 415 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 PCYOX1LQ8NBM8 494 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 ZNF296Q8WUU4 475 aaPredicted RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 ROPN1LQ96C74 230 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 DDX50Q9BQ39 737 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 AKTIPQ9H8T0 292 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 HCSTQ9UBK5 93 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 CROTQ9UKG9 612 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 TBC1D30Q9Y2I9 924 aa22.19■■□□□ 1.14
NKX2-1-201ENST00000354822 E7ENX8 843 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 PITPNM1O00562 1244 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 MRASO14807 208 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 TRIM24O15164 1050 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 COCHO43405 550 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 VPS4BO75351 444 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 CD9P21926 228 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 FMO4P31512 558 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 RNF220Q5VTB9 566 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 TMEM173Q86WV6 379 aaPredicted RBP22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 DCUN1D1Q96GG9 259 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 TRPM5Q9NZQ8 1165 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 RAB26Q9ULW5 256 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 RNF112Q9ULX5 631 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 MTF2Q9Y483 593 aaPredicted RBP22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 ACTL7AQ9Y615 435 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 H3BMM5 538 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 RGRP47804 291 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 GRM2Q14416 872 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 CYTH1Q15438 398 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 GEN1Q17RS7 908 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 SAMD4BQ5PRF9 694 aaKnown RBP22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 ADGRF1Q5T601 910 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 KANK2Q63ZY3 851 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 PAOXQ6QHF9 649 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 PAQR3Q6TCH7 311 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 LRRC43Q8N309 656 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 MDGA1Q8NFP4 955 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 HSFX1Q9UBD0 423 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 CEP350Q5VT06 3117 aa22.18■■□□□ 1.14
NKX2-1-201ENST00000354822 CAPN8A6NHC0 703 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 STC2O76061 302 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 PRLP01236 227 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 CORO1AP31146 461 aaKnown RBP22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 OR1D2P34982 312 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 TTPAP49638 278 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 APLP1P51693 650 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 FBXO39Q8N4B4 442 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 TWIST2Q8WVJ9 160 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 C3orf30Q96M34 536 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms