RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 RNF11Q9Y3C5 154 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 PCDHB5Q9Y5E4 795 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 PTPRDP23468 1912 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 PDLIM1O00151 329 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 C8BP07358 591 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 CAPN3P20807 821 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 FDXRP22570 491 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 ARL1P40616 181 aaPredicted RBP19.52■□□□□ 0.72
COL13A1-201ENST00000354547 SCNN1BP51168 640 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 DIO3P55073 304 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 CRHR2Q13324 411 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 DYNC1I2Q13409 638 aaKnown RBP19.52■□□□□ 0.72
COL13A1-201ENST00000354547 FUT11Q495W5 492 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 CLLU1OSQ5K130 101 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 TMEM126BQ8IUX1 230 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 LGI2Q8N0V4 545 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 L3HYPDHQ96EM0 354 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 UROC1Q96N76 676 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 MRPL40Q9NQ50 206 aaKnown RBP19.52■□□□□ 0.72
COL13A1-201ENST00000354547 MAP10Q9P2G4 905 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 IKZF3Q9UKT9 509 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 RNF112Q9ULX5 631 aa19.52■□□□□ 0.72
COL13A1-201ENST00000354547 LAMA2P24043 3122 aaKnown RBP19.52■□□□□ 0.71
COL13A1-201ENST00000354547 LOC285095A0A1B0GVY8 99 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 H3BSA7 217 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 NME4O00746 187 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 CYBAP13498 195 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 MTHFD2P13995 350 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 PBX3P40426 434 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 TRIML2Q8N7C3 387 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 PCYOX1LQ8NBM8 494 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 DNAJB14Q8TBM8 379 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 VPS33AQ96AX1 596 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 MRPS26Q9BYN8 205 aaKnown RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 UPF3AQ9H1J1 476 aaKnown RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 TUBB1Q9H4B7 451 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 V9GYQ6 96 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 ENPP3O14638 875 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 RTN3O95197 1032 aaPredicted RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 PRDX3P30048 256 aaKnown RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 HSPA13P48723 471 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 PLOD1Q02809 727 aaPredicted RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 TSNQ15631 228 aaKnown RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 CCT7Q99832 543 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 TRMOQ9BU70 441 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 GALPQ9UBC7 116 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 HCSTQ9UBK5 93 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 CDC7O00311 574 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 RPP40O75818 363 aaKnown RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 SEC24DO94855 1032 aaPredicted RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 SLC7A1P30825 629 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 AGTR2P50052 363 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 MAP7Q14244 749 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 MFSD14CQ5VZR4 134 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 OR4K2Q8NGD2 314 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 STON2Q8WXE9 905 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 CRISPLD1Q9H336 500 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 SARS2Q9NP81 518 aaKnown RBP19.51■□□□□ 0.71
COL13A1-201ENST00000354547 SLC4A7Q9Y6M7 1214 aa19.51■□□□□ 0.71
COL13A1-201ENST00000354547 NT5C1B-RDH14C9J2C7 533 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 SOCS2O14508 198 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 TSPAN3O60637 253 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 BAIAP3O94812 1187 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 HSPA8P11142 646 aaKnown RBP19.5■□□□□ 0.71
COL13A1-201ENST00000354547 CDH15P55291 814 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 NRG1Q02297 640 aaPredicted RBP19.5■□□□□ 0.71
COL13A1-201ENST00000354547 IL10RBQ08334 325 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 NFE2Q16621 373 aaPredicted RBP19.5■□□□□ 0.71
COL13A1-201ENST00000354547 NADSYN1Q6IA69 706 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 ZNF598Q86UK7 904 aaKnown RBP19.5■□□□□ 0.71
COL13A1-201ENST00000354547 MIER2Q8N344 545 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 TMIGD2Q96BF3 282 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 EFHD1Q9BUP0 239 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 CCDC68Q9H2F9 335 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 BPIFA1Q9NP55 256 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.5■□□□□ 0.71
COL13A1-201ENST00000354547 SPO11Q9Y5K1 396 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 DOCK4Q8N1I0 1966 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 FNDC1Q4ZHG4 1894 aaPredicted RBP19.5■□□□□ 0.71
COL13A1-201ENST00000354547 SCAMP3O14828 347 aaKnown RBP19.5■□□□□ 0.71
COL13A1-201ENST00000354547 CCND3P30281 292 aaPredicted RBP19.5■□□□□ 0.71
COL13A1-201ENST00000354547 FLT3LGP49771 235 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 TBCELQ5QJ74 424 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 TEX26Q8N6G2 289 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 CDKN2AIPNLQ96HQ2 116 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 HIC2Q96JB3 615 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 CROCCQ5TZA2 2017 aa19.5■□□□□ 0.71
COL13A1-201ENST00000354547 TCRBV3S1A0A5B6 114 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 WISP3O95389 354 aaPredicted RBP19.49■□□□□ 0.71
COL13A1-201ENST00000354547 MT-ND1P03886 318 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 SERPINF2P08697 491 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 RGRP47804 291 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 GALNT1Q10472 559 aaPredicted RBP19.49■□□□□ 0.71
COL13A1-201ENST00000354547 FBXO39Q8N4B4 442 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 TSPAN14Q8NG11 270 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 C1orf50Q9BV19 199 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 ZNF696Q9H7X3 374 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 POLG2Q9UHN1 485 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 SARDHQ9UL12 918 aa19.49■□□□□ 0.71
COL13A1-201ENST00000354547 MTHFD1P11586 935 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms