RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ATP6V1B1P15313 513 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ALFQ53S48 1182 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 CPNE9Q8IYJ1 553 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ASZ1Q8WWH4 475 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 CLIC5Q9NZA1 410 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 TEX28O15482 410 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 HLA-EP13747 358 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 GABRB2P47870 512 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 MAD2L1Q13257 205 aaPredicted RBP13.68□□□□□ -0.22
SMC6-201ENST00000351948 DNAJB14Q8TBM8 379 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 REPS1Q96D71 796 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 SUFUQ9UMX1 484 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 ACTL7BQ9Y614 415 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 KCNE2Q9Y6J6 123 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 COCHO43405 550 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 ERAL1O75616 437 aaKnown RBP13.68□□□□□ -0.22
SMC6-201ENST00000351948 PPIDQ08752 370 aaKnown RBP13.68□□□□□ -0.22
SMC6-201ENST00000351948 SIDT2Q8NBJ9 832 aaKnown RBP13.68□□□□□ -0.22
SMC6-201ENST00000351948 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 SNX6Q9UNH7 406 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 C2orf78A6NCI8 922 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 SMNDC1O75940 238 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMC6-201ENST00000351948 ALBP02768 609 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 ATP6V0D1P61421 351 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 ELP6Q0PNE2 266 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 HDDC3Q8N4P3 179 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 CCDC134Q9H6E4 229 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 KCNK4Q9NYG8 393 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 ADH5P11766 374 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 TYRP14679 529 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 CACNG1Q06432 222 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 ZBTB17Q13105 803 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 CLLU1OSQ5K130 101 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 TBCELQ5QJ74 424 aa13.68□□□□□ -0.22
SMC6-201ENST00000351948 C9JVG2 144 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 SOCS7O14512 581 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 AZIN1O14977 448 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
SMC6-201ENST00000351948 FRG1Q14331 258 aaKnown RBP13.67□□□□□ -0.22
SMC6-201ENST00000351948 LYPLAL1Q5VWZ2 237 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 ISLR2Q6UXK2 745 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 CCDC81Q6ZN84 652 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 TMPRSS6Q8IU80 811 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 VMP1Q96GC9 406 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 TMLHEQ9NVH6 421 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 ARIH1Q9Y4X5 557 aaPredicted RBP13.67□□□□□ -0.22
SMC6-201ENST00000351948 HDAC3O15379 428 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 MLYCDO95822 493 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 RFC2P35250 354 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 TAS2R39P59534 338 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 P3H2Q8IVL5 708 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 NAT14Q8WUY8 206 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 KBTBD7Q8WVZ9 684 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 BTBD10Q9BSF8 475 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 OSBPL2Q9H1P3 480 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 STARD13Q9Y3M8 1113 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 MBLAC1A4D2B0 266 aaPredicted RBP13.67□□□□□ -0.22
SMC6-201ENST00000351948 SLC1A2P43004 574 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 HSPA7P48741 367 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 IRX1P78414 480 aaPredicted RBP13.67□□□□□ -0.22
SMC6-201ENST00000351948 PRKCQQ04759 706 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 NAE1Q13564 534 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 ZDHHC24Q6UX98 284 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 TMPRSS11BQ86T26 416 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 PHYKPLQ8IUZ5 450 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 BRSK1Q8TDC3 778 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 TRMT61BQ9BVS5 477 aaKnown RBP13.67□□□□□ -0.22
SMC6-201ENST00000351948 ZNF358Q9NW07 568 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 TBC1D30Q9Y2I9 924 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 PLLPQ9Y342 182 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 CCDC162PA2VCL2 907 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 ATG13O75143 517 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 GRSF1Q12849 480 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMC6-201ENST00000351948 UBXN11Q5T124 520 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 VWA5B1Q5TIE3 1220 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 CLEC6AQ6EIG7 209 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 OR9Q1Q8NGQ5 310 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 ZFYVE19Q96K21 471 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 RNF145Q96MT1 663 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 ASB2Q96Q27 587 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 IGSF9Q9P2J2 1179 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 SLC2A6Q9UGQ3 507 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 KNL1Q8NG31 2342 aa13.67□□□□□ -0.22
SMC6-201ENST00000351948 LEFTY2O00292 366 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 BPGMP07738 259 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 DEFB103AP81534 67 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 DAB2P98082 770 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 NRG1Q02297 640 aaPredicted RBP13.66□□□□□ -0.22
SMC6-201ENST00000351948 PTPRCAPQ14761 206 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 CUZD1Q86UP6 607 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 ZBTB2Q8N680 514 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 SH3GL1Q99961 368 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 SLC25A23Q9BV35 468 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 DPEP2Q9H4A9 486 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 RERGLQ9H628 205 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms