RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 PRNPP04156 253 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 APODP05090 189 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 BPGMP07738 259 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 BMP1P13497 986 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 XPAP23025 273 aaPredicted RBP18.62■□□□□ 0.57
PTN-201ENST00000348225 PPARGP37231 505 aaPredicted RBP18.62■□□□□ 0.57
PTN-201ENST00000348225 SPAM1P38567 509 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 GRIA2P42262 883 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 HTR4Q13639 388 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 ZNF234Q14588 700 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 ZDHHC20Q5W0Z9 365 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 LRRC66Q68CR7 880 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 SERPINA13PQ6UXR4 307 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 CERS6Q6ZMG9 384 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 NUDCD3Q8IVD9 361 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 PLD6Q8N2A8 252 aaKnown RBP18.62■□□□□ 0.57
PTN-201ENST00000348225 STK40Q8N2I9 435 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 OR8D1Q8WZ84 308 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 SUSD6Q92537 303 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 GRAMD1AQ96CP6 724 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 TTC1Q99614 292 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 PITPNM3Q9BZ71 974 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 UBA6A0AVT1 1052 aaPredicted RBP18.61■□□□□ 0.57
PTN-201ENST00000348225 UPK3BL1B0FP48 263 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 UPK3BL2E5RIL1 263 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 ARNTLO00327 626 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 KLF11O14901 512 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 CTSLP07711 333 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 PRSS56P0CW18 603 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 ZNF30P17039 623 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 ITGALP20701 1170 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 MLLT1Q03111 559 aaPredicted RBP18.61■□□□□ 0.57
PTN-201ENST00000348225 ARHGEF7Q14155 803 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 ZSCAN26Q16670 478 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 ATG16L1Q676U5 607 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 PSAPL1Q6NUJ1 521 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 TAS2R42Q7RTR8 314 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 TSPAN33Q86UF1 283 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 ZNF366Q8N895 744 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 CSGALNACT1Q8TDX6 532 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 LPGAT1Q92604 370 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 PBXIP1Q96AQ6 731 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 GAS2L1Q99501 681 aaPredicted RBP18.61■□□□□ 0.57
PTN-201ENST00000348225 OLFM1Q99784 485 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 AARSD1Q9BTE6 412 aaKnown RBP18.61■□□□□ 0.57
PTN-201ENST00000348225 RPP25Q9BUL9 199 aaKnown RBP18.61■□□□□ 0.57
PTN-201ENST00000348225 MTG2Q9H4K7 406 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 NMRAL1Q9HBL8 299 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 POPDC3Q9HBV1 291 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 SIRPGQ9P1W8 387 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 B4GALT6Q9UBX8 382 aa18.61■□□□□ 0.57
PTN-201ENST00000348225 GLYATL1P3A0A0U1RQE8 302 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 ERICH4A6NGS2 130 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 ANHXE9PGG2 379 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 SRP72O76094 671 aaKnown RBP18.6■□□□□ 0.57
PTN-201ENST00000348225 PRAMEF1O95521 474 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 BPIP17213 487 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 BGNP21810 368 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 VIPR1P32241 457 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 IRX4P78413 519 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 ELAVL3Q14576 367 aaKnown RBP18.6■□□□□ 0.57
PTN-201ENST00000348225 ZNF460Q14592 562 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 LYPLAL1Q5VWZ2 237 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 FAM151BQ6UXP7 276 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 SNX20Q7Z614 316 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 SUGP1Q8IWZ8 645 aaKnown RBP18.6■□□□□ 0.57
PTN-201ENST00000348225 PIANPQ8IYJ0 282 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 PNPLA1Q8N8W4 532 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 C1QTNF1Q9BXJ1 281 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 TMEM245Q9H330 911 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 FAM96AQ9H5X1 160 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 GPAMQ9HCL2 828 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 THAP10Q9P2Z0 257 aaPredicted RBP18.6■□□□□ 0.57
PTN-201ENST00000348225 A8MX80 341 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 KLHL2O95198 593 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 FDXRP22570 491 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 LHCGRP22888 699 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 SLC26A3P40879 764 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 PTGER3P43115 390 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 C9orf64Q5T6V5 341 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 NAIF1Q69YI7 327 aaPredicted RBP18.6■□□□□ 0.57
PTN-201ENST00000348225 ZNF549Q6P9A3 640 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 FAM47EQ6ZV65 393 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 TMIEQ8NEW7 156 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 RDH11Q8TC12 318 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 KCTD4Q8WVF5 259 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 SREK1Q8WXA9 508 aaKnown RBP18.6■□□□□ 0.57
PTN-201ENST00000348225 MECRQ9BV79 373 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 ZNF358Q9NW07 568 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 COPG2Q9UBF2 871 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 SUN2Q9UH99 717 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 RUVBL2Q9Y230 463 aaKnown RBP18.6■□□□□ 0.57
PTN-201ENST00000348225 COMMD10Q9Y6G5 202 aa18.6■□□□□ 0.57
PTN-201ENST00000348225 C5orf42Q9H799 3197 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 C16orf96A6NNT2 1141 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 EDF1O60869 148 aaKnown RBP18.59■□□□□ 0.57
PTN-201ENST00000348225 CHRM1P11229 460 aaPredicted RBP18.59■□□□□ 0.57
PTN-201ENST00000348225 HLA-EP13747 358 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 TIMP2P16035 220 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 GMPRP36959 345 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms