RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 KCTD4Q8WVF5 259 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 LPGAT1Q92604 370 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 AARSD1Q9BTE6 412 aaKnown RBP21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 TRMT61BQ9BVS5 477 aaKnown RBP21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 SLCO1B3Q9NPD5 702 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 GTSE1Q9NYZ3 720 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 RUVBL2Q9Y230 463 aaKnown RBP21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 FNDC3AQ9Y2H6 1198 aaKnown RBP21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 KLHL2O95198 593 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 CHI3L2Q15782 390 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 ITPRIPL2Q3MIP1 535 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 PSAPL1Q6NUJ1 521 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 ZNF549Q6P9A3 640 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 FOXR1Q6PIV2 292 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 CENPLQ8N0S6 344 aaPredicted RBP21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 POPDC3Q9HBV1 291 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 COPG2Q9UBF2 871 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 DKK3Q9UBP4 350 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 EDDM13A0A1B0GTR0 161 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 UBA6A0AVT1 1052 aaPredicted RBP21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 TBC1D3BA6NDS4 549 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 CPA3P15088 417 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 FDXRP22570 491 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 ALDH3A1P30838 453 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 SPAM1P38567 509 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 CDKN1CP49918 316 aaPredicted RBP21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 PGGT1BP53609 377 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 CDKN2DP55273 166 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 GRIN2CQ14957 1233 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 PCLAFQ15004 111 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 ZNF805Q5CZA5 627 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 LRRC66Q68CR7 880 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 CERS6Q6ZMG9 384 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 SPATA21Q7Z572 469 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 TSPAN33Q86UF1 283 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 SPATS2Q86XZ4 545 aaKnown RBP21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 PIANPQ8IYJ0 282 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 ANKS4BQ8N8V4 417 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 RDH11Q8TC12 318 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 SCYL1Q96KG9 808 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 TSSK1BQ9BXA7 367 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 CCDC68Q9H2F9 335 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 TTYH1Q9H313 450 aaPredicted RBP21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 MTG2Q9H4K7 406 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 FAM96AQ9H5X1 160 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 GPAMQ9HCL2 828 aa21.4■■□□□ 1.02
TSPAN3-202ENST00000346495 PRRC2BQ5JSZ5 2229 aaKnown RBP21.39■■□□□ 1.02
TSPAN3-202ENST00000346495 A8MX80 341 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 SRP72O76094 671 aaKnown RBP21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 IL1BP01584 269 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 CTSLP07711 333 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 CYP2A6P11509 494 aaPredicted RBP21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 PPARGP37231 505 aaPredicted RBP21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 SLC26A3P40879 764 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 HNRNPA1L2Q32P51 320 aaKnown RBP21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 LRRC8EQ6NSJ5 796 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 TAS2R42Q7RTR8 314 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 OTOAQ7RTW8 1153 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 STK40Q8N2I9 435 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 SMRP1Q8NCR6 262 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 PPP1R14CQ8TAE6 165 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 TTC1Q99614 292 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 EPS15L1Q9UBC2 864 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 B4GALT6Q9UBX8 382 aa21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 USP15Q9Y4E8 981 aaPredicted RBP21.39■■□□□ 1.01
TSPAN3-202ENST00000346495 UPK3BL1B0FP48 263 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 UPK3BL2E5RIL1 263 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 BPIP17213 487 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 ITGALP20701 1170 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 PTGER3P43115 390 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 SUOXP51687 545 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 ZNF234Q14588 700 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 ITIH4Q14624 930 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 FAM83EQ2M2I3 478 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 LYPLAL1Q5VWZ2 237 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 ZDHHC20Q5W0Z9 365 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 CGB2Q6NT52 195 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 FAM151BQ6UXP7 276 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 NUDT18Q6ZVK8 323 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 SNX20Q7Z614 316 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 ZNF366Q8N895 744 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 SREK1Q8WXA9 508 aaKnown RBP21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 PBXIP1Q96AQ6 731 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 NXNL1Q96CM4 212 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 COMMD10Q9Y6G5 202 aa21.38■■□□□ 1.01
TSPAN3-202ENST00000346495 GLYATL1P3A0A0U1RQE8 302 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 GAPDHSO14556 408 aaPredicted RBP21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 KAT7O95251 611 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 WISP3O95389 354 aaPredicted RBP21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 PRAMEF1O95521 474 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 PRNPP04156 253 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 LTA4HP09960 611 aaKnown RBP21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 ZNF30P17039 623 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 KCNA4P22459 653 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 LHCGRP22888 699 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 FMO4P31512 558 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 VIPR1P32241 457 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 GRIA2P42262 883 aa21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 ADARP55265 1226 aaKnown RBP21.37■■□□□ 1.01
TSPAN3-202ENST00000346495 DLG1Q12959 904 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms