RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DUPD1Q68J44 220 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 SEPT12Q8IYM1 358 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 PTGR2Q8N8N7 351 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 KLHL5Q96PQ7 755 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 KCNE2Q9Y6J6 123 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 USP31Q70CQ4 1352 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 ARF4P18085 180 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 RPS9P46781 194 aaKnown RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 ECT2LQ008S8 904 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 JAZF1Q86VZ6 243 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 CPNE2Q96FN4 548 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 GPATCH1Q9BRR8 931 aaKnown RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 SEC14L3Q9UDX4 400 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 TMED5Q9Y3A6 229 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 RBM7Q9Y580 266 aaKnown RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 EPHA3P29320 983 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 RPL38P63173 70 aaKnown RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 VMACQ2NL98 169 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 CREB3L1Q96BA8 519 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 BHLHE41Q9C0J9 482 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■■■□ 24.5
HDAC4-201ENST00000345617 COLGALT2Q8IYK4 626 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 POP1Q99575 1024 aaKnown RBP19.33■□□□□ 0.69
HDAC4-201ENST00000345617 CXorf21Q9HAI6 301 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 ZFP14Q9HCL3 533 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 ATP13A1Q9HD20 1204 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 SNX15Q9NRS6 342 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 NRXN1Q9ULB1 1477 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 PPEF2O14830 753 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 PCDH8O95206 1070 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 F8A1P23610 371 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 SEPHS1P49903 392 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 SNRPD1P62314 119 aaKnown RBP19.33■□□□□ 0.69
HDAC4-201ENST00000345617 RBFAQ8N0V3 343 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF567Q8N184 647 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 KCTD15Q96SI1 283 aaPredicted RBP19.33■□□□□ 0.69
HDAC4-201ENST00000345617 YTHDF1Q9BYJ9 559 aaKnown RBP19.33■□□□□ 0.69
HDAC4-201ENST00000345617 QTRT2Q9H974 415 aaKnown RBP19.33■□□□□ 0.69
HDAC4-201ENST00000345617 RLN2P04090 185 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 NOS2P35228 1153 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 FAM98AQ8NCA5 519 aaKnown RBP19.33■□□□□ 0.69
HDAC4-201ENST00000345617 DENND2DQ9H6A0 471 aaPredicted RBP19.33■□□□□ 0.69
HDAC4-201ENST00000345617 POLR2JP52435 117 aaKnown RBP19.33■□□□□ 0.69
HDAC4-201ENST00000345617 TAPT1Q6NXT6 567 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF639Q9UID6 485 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 TRAF6Q9Y4K3 522 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 DGKBQ9Y6T7 804 aa19.33■□□□□ 0.69
HDAC4-201ENST00000345617 A0A0J9YYE9 177 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 OR10H2O60403 315 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 PSMB4P28070 264 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 LAPTM4BQ86VI4 370 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 RHBDF1Q96CC6 855 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 MSL3P1P0C860 447 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 NDST1P52848 882 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 ALYREFQ86V81 257 aaKnown RBP19.33■□□□□ 0.68
HDAC4-201ENST00000345617 PCDHGB1Q9Y5G3 927 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 DISP2A7MBM2 1401 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 NUP205Q92621 2012 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 ECHS1P30084 290 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 OCLNQ16625 522 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 XKR6Q5GH73 641 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 SCUBE3Q8IX30 993 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 UFD1Q92890 307 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 ZNF347Q96SE7 839 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 SYT15Q9BQS2 421 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 OR12D3Q9UGF7 316 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 LMTK2Q8IWU2 1503 aa19.33■□□□□ 0.68
HDAC4-201ENST00000345617 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 THPOP40225 353 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 SREBF2Q12772 1141 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 WNT8BQ93098 351 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 AHCYL2Q96HN2 611 aaKnown RBP19.32■□□□□ 0.68
HDAC4-201ENST00000345617 COMMD4Q9H0A8 199 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 DPPA5A6NC42 116 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 RBM48Q5RL73 367 aaKnown RBP19.32■□□□□ 0.68
HDAC4-201ENST00000345617 FCRL4Q96PJ5 515 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 CD163L1Q9NR16 1453 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 FGBP02675 491 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 TMEM17Q86X19 198 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 ZNF354BQ96LW1 612 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 RC3H2Q9HBD1 1191 aaKnown RBP19.32■□□□□ 0.68
HDAC4-201ENST00000345617 CLCN2P51788 898 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 PPP3R1P63098 170 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 MARK4Q96L34 752 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 TRUB2O95900 331 aaKnown RBP19.32■□□□□ 0.68
HDAC4-201ENST00000345617 PSKH1P11801 424 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 TFEBP19484 476 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 RNF220Q5VTB9 566 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 CLEC4AQ9UMR7 237 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 OR10H1Q9Y4A9 318 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 SALL1Q9NSC2 1324 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 CREMQ03060 361 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 AMIGO2Q86SJ2 522 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 UNC93AQ86WB7 457 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 FAM13CQ8NE31 585 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 CDADC1Q9BWV3 514 aa19.32■□□□□ 0.68
HDAC4-201ENST00000345617 ZNF638Q14966 1978 aaKnown RBP19.32■□□□□ 0.68
HDAC4-201ENST00000345617 NUAK1O60285 661 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 PDHA2P29803 388 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 SLC41A1Q8IVJ1 513 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms