RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 CES3Q6UWW8 571 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 RFLNAQ6ZTI6 216 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 NLRP8Q86W28 1048 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 GPR26Q8NDV2 337 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 CADM4Q8NFZ8 388 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 CDKN2AIPNLQ96HQ2 116 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 GPR174Q9BXC1 333 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 C1QTNF1Q9BXJ1 281 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 C1QTNF7Q9BXJ2 289 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 FAM83DQ9H4H8 585 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 C6orf106Q9H6K1 298 aaPredicted RBP17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 FKBPLQ9UIM3 349 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 COQ6Q9Y2Z9 468 aa17.83■□□□□ 0.45
SDCBP2-201ENST00000339987 TRPM6Q9BX84 2022 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 NDUFS2O75306 463 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 ERLIN1O75477 346 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 NUDT1P36639 197 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 PMS2P54278 862 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 TMPRSS15P98073 1019 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 XIAPP98170 497 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 SGCGQ13326 291 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 FGL2Q14314 439 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 C11orf74Q86VG3 221 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 GSDMBQ8TAX9 411 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 HDAC10Q969S8 669 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 NUS1Q96E22 293 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 SGSM3Q96HU1 749 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 TBATAQ96M53 351 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 SLC17A9Q9BYT1 436 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 ABCG8Q9H221 673 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 SEMA4AQ9H3S1 761 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 LRRC4CQ9HCJ2 640 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 IL26Q9NPH9 171 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 APPL1Q9UKG1 709 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 PLXNA2O75051 1894 aa17.82■□□□□ 0.44
SDCBP2-201ENST00000339987 CCDC162PA2VCL2 907 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 IGHV4-34P06331 123 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 ARNTP27540 789 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 ARCN1P48444 511 aaKnown RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 GPX6P59796 221 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 PRAMEP78395 509 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 DPTQ07507 201 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 ANGPT1Q15389 498 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 KYNUQ16719 465 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 LONRF1Q17RB8 773 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 HENMT1Q5T8I9 393 aaKnown RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 AFTPHQ6ULP2 937 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 CYS1Q717R9 158 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 DENND6BQ8NEG7 585 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 GAB3Q8WWW8 586 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 LENG8Q96PV6 779 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 INVSQ9Y283 1065 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 GLYATL1P3A0A0U1RQE8 302 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 CCL22O00626 93 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 GAPDHSO14556 408 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 GALR2O43603 387 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 VAPBO95292 243 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 SSTR1P30872 391 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 PEX6Q13608 980 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 SETMARQ53H47 684 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 PDPK2PQ6A1A2 396 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 ZNF449Q6P9G9 518 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 C3orf62Q6ZUJ4 267 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 TRAM1L1Q8N609 369 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 TP53I13Q8NBR0 393 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 HNRNPLLQ8WVV9 542 aaKnown RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 AP2M1Q96CW1 435 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 RIOK2Q9BVS4 552 aaKnown RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 FUT8Q9BYC5 575 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 SUDS3Q9H7L9 328 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 ZSCAN32Q9NX65 697 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 MOCS1Q9NZB8 636 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 CD84Q9UIB8 345 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 DMTF1Q9Y222 760 aa17.81■□□□□ 0.44
SDCBP2-201ENST00000339987 METTL12A8MUP2 240 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 MAP3K13O43283 966 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 SRP72O76094 671 aaKnown RBP17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 FSBPO95073 299 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 PAK4O96013 591 aaPredicted RBP17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 GOT2P00505 430 aaKnown RBP17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 PYGLP06737 847 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 ABHD2P08910 425 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 SP9P0CG40 484 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 BCKDHBP21953 392 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 TEAD1P28347 426 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 MAT2AP31153 395 aaKnown RBP17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 MC4RP32245 332 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 CNR2P34972 360 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 PHBP35232 272 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 RPL6Q02878 288 aaKnown RBP17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 LRRC14Q15048 493 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 CHRNA6Q15825 494 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 WSCD2Q2TBF2 565 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 SPDYCQ5MJ68 293 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 ALS2CLQ60I27 953 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 FAM151BQ6UXP7 276 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 LMNTD2Q8IXW0 634 aa17.8■□□□□ 0.44
SDCBP2-201ENST00000339987 MREGQ8N565 214 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms