RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 NSMCE4AQ9NXX6 385 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 ANKRD31Q8N7Z5 1873 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 DHRS12A0PJE2 317 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 CCDC154A6NI56 674 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 PRRG1O14668 218 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 IRAK2O43187 625 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 AQP1P29972 269 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 PBLDP30039 288 aaPredicted RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 DPP6P42658 865 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 DGKEP52429 567 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 CDC42EP1Q00587 391 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 PLD1Q13393 1074 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 GCNT7Q6ZNI0 430 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 PGAM4Q8N0Y7 254 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 C3orf30Q96M34 536 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 PTPN18Q99952 460 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 ZYG11BQ9C0D3 744 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 VRTNQ9H8Y1 702 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 TBC1D13Q9NVG8 400 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 FKBPLQ9UIM3 349 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 ADAM28Q9UKQ2 775 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 MYRFQ9Y2G1 1151 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 PPME1Q9Y570 386 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 MATN3O15232 486 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 NOBOXO60393 691 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 UGT1A1P22309 533 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 UGT1A4P22310 534 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 UGT1A3P35503 534 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 UGT1A5P35504 534 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 RGS2P41220 211 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 HMGCS1Q01581 520 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 HSPA14Q0VDF9 509 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 BOP1Q14137 746 aaKnown RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 FRG1Q14331 258 aaKnown RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 PAFAH1B3Q15102 231 aaKnown RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 B3GNT6Q6ZMB0 384 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 TMCO2Q7Z6W1 182 aaPredicted RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 GALNT5Q7Z7M9 940 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 IGSF8Q969P0 613 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 HSPBAP1Q96EW2 488 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 LINGO1Q96FE5 620 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 VTI1BQ9UEU0 232 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 OAZ3Q9UMX2 235 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 LTBP4Q8N2S1 1624 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 DYTNA2CJ06 578 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 EI24O14681 340 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 SNAP91O60641 907 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 GNAO1P09471 354 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 AKR1A1P14550 325 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 RPL38P63173 70 aaKnown RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 ZNF177Q13360 481 aaPredicted RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 TRIM25Q14258 630 aaKnown RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 SIRPB2Q5JXA9 342 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 TSTD2Q5T7W7 516 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 TIGD7Q6NT04 549 aaPredicted RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 KLHDC10Q6PID8 442 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 SPESP1Q6UW49 350 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 SERPINB11Q96P15 392 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 VAT1Q99536 393 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 EPS8L2Q9H6S3 715 aa11.92□□□□□ -0.5
USP1-201ENST00000339950 MAGED1Q9Y5V3 778 aaPredicted RBP11.92□□□□□ -0.5
USP1-201ENST00000339950 TMEM114B3SHH9 223 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 KCNH1O95259 989 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 CPSF4O95639 269 aaKnown RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 MYL4P12829 197 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 WARSP23381 471 aaKnown RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 GRIA2P42262 883 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 KCNA10Q16322 511 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 SAMD4BQ5PRF9 694 aaKnown RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 PERM1Q5SV97 790 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 TAF2Q6P1X5 1199 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 XKR5Q6UX68 686 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 DCP1BQ8IZD4 617 aaKnown RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 AUTS2Q8WXX7 1259 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 PYCR2Q96C36 320 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 MRGPRX2Q96LB1 330 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 SMAD5Q99717 465 aaKnown RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 WDR70Q9NW82 654 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 TAS2R13Q9NYV9 303 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 CRLS1Q9UJA2 301 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 KLHL33A6NCF5 533 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 TBKBP1A7MCY6 615 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 PSMD3O43242 534 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 B4GAT1O43505 415 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 KPNA6O60684 536 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 PQBP1O60828 265 aaKnown RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 F2P00734 622 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 ALPIP09923 528 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 RHOAP61586 193 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 NAA20P61599 178 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 GALNT2Q10471 571 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 OTUD1Q5VV17 481 aaPredicted RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 NANOGNBQ7Z5D8 188 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 MFSD6LQ8IWD5 586 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 LZTR1Q8N653 840 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 OR4L1Q8NH43 312 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms